Gene : Eucgr.G03424 E. grandis v2.0
Defline:  (1 of 9) PTHR10264:SF92 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 Genomic Order:  2854
Name:  ? Eucgr.G03424 Secondary Identifier:  ? PAC:32070651
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03424 0.5kb upstream 0.5kb upstream 2049 true Chr07: 54812606-54814654 Eucalyptus grandis
Eucgr.G03424 0.5kb upstream 0.5kb upstream 500 false Chr07: 54812606-54813105 Eucalyptus grandis
Eucgr.G03424 0.5kb downstream 0.5kb downstream 2049 true Chr07: 54813106-54815154 Eucalyptus grandis
Eucgr.G03424 0.5kb downstream 0.5kb downstream 500 false Chr07: 54814655-54815154 Eucalyptus grandis
Eucgr.G03424 1.0kb upstream 1.0kb upstream 2549 true Chr07: 54812106-54814654 Eucalyptus grandis
Eucgr.G03424 1.0kb upstream 1.0kb upstream 1000 false Chr07: 54812106-54813105 Eucalyptus grandis
Eucgr.G03424 1.0kb downstream 1.0kb downstream 2549 true Chr07: 54813106-54815654 Eucalyptus grandis
Eucgr.G03424 1.0kb downstream 1.0kb downstream 1000 false Chr07: 54814655-54815654 Eucalyptus grandis
Eucgr.G03424 2.0kb upstream 2.0kb upstream 3549 true Chr07: 54811106-54814654 Eucalyptus grandis
Eucgr.G03424 2.0kb upstream 2.0kb upstream 2000 false Chr07: 54811106-54813105 Eucalyptus grandis
Eucgr.G03424 2.0kb downstream 2.0kb downstream 3549 true Chr07: 54813106-54816654 Eucalyptus grandis
Eucgr.G03424 2.0kb downstream 2.0kb downstream 2000 false Chr07: 54814655-54816654 Eucalyptus grandis
Eucgr.G03424 5.0kb upstream 5.0kb upstream 6549 true Chr07: 54808106-54814654 Eucalyptus grandis
Eucgr.G03424 5.0kb upstream 5.0kb upstream 5000 false Chr07: 54808106-54813105 Eucalyptus grandis
Eucgr.G03424 5.0kb downstream 5.0kb downstream 6549 true Chr07: 54813106-54819654 Eucalyptus grandis
Eucgr.G03424 5.0kb downstream 5.0kb downstream 5000 false Chr07: 54814655-54819654 Eucalyptus grandis
Eucgr.G03424 10.0kb upstream 10.0kb upstream 11549 true Chr07: 54803106-54814654 Eucalyptus grandis
Eucgr.G03424 10.0kb upstream 10.0kb upstream 10000 false Chr07: 54803106-54813105 Eucalyptus grandis
Eucgr.G03424 10.0kb downstream 10.0kb downstream 11549 true Chr07: 54813106-54824654 Eucalyptus grandis
Eucgr.G03424 10.0kb downstream 10.0kb downstream 10000 false Chr07: 54814655-54824654 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027594 5273 Angiosperm View MSA
124052393 5270 Rosid View MSA
123752499 5271 Pentapetalae View MSA
122798658 5272 Eudicot View MSA
121348601 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.17914 0.0 10.7195    
cufflinks 2.07069 0.0 7.02917   Low
cufflinks 2.54052 0.0 8.34427    
cufflinks 2.44453 0.0 9.05113    
cufflinks 4.86015 0.0 14.1978   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain