Gene : Eucgr.G03433 E. grandis v2.0
Defline:  (1 of 9) PTHR10264:SF92 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 Genomic Order:  2853
Name:  ? Eucgr.G03433 Secondary Identifier:  ? PAC:32072403
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03433 0.5kb upstream 0.5kb upstream 2844 true Chr07: 54811440-54814283 Eucalyptus grandis
Eucgr.G03433 0.5kb upstream 0.5kb upstream 500 false Chr07: 54811440-54811939 Eucalyptus grandis
Eucgr.G03433 0.5kb downstream 0.5kb downstream 2844 true Chr07: 54811940-54814783 Eucalyptus grandis
Eucgr.G03433 0.5kb downstream 0.5kb downstream 500 false Chr07: 54814284-54814783 Eucalyptus grandis
Eucgr.G03433 1.0kb upstream 1.0kb upstream 3344 true Chr07: 54810940-54814283 Eucalyptus grandis
Eucgr.G03433 1.0kb upstream 1.0kb upstream 1000 false Chr07: 54810940-54811939 Eucalyptus grandis
Eucgr.G03433 1.0kb downstream 1.0kb downstream 3344 true Chr07: 54811940-54815283 Eucalyptus grandis
Eucgr.G03433 1.0kb downstream 1.0kb downstream 1000 false Chr07: 54814284-54815283 Eucalyptus grandis
Eucgr.G03433 2.0kb upstream 2.0kb upstream 4344 true Chr07: 54809940-54814283 Eucalyptus grandis
Eucgr.G03433 2.0kb upstream 2.0kb upstream 2000 false Chr07: 54809940-54811939 Eucalyptus grandis
Eucgr.G03433 2.0kb downstream 2.0kb downstream 4344 true Chr07: 54811940-54816283 Eucalyptus grandis
Eucgr.G03433 2.0kb downstream 2.0kb downstream 2000 false Chr07: 54814284-54816283 Eucalyptus grandis
Eucgr.G03433 5.0kb upstream 5.0kb upstream 7344 true Chr07: 54806940-54814283 Eucalyptus grandis
Eucgr.G03433 5.0kb upstream 5.0kb upstream 5000 false Chr07: 54806940-54811939 Eucalyptus grandis
Eucgr.G03433 5.0kb downstream 5.0kb downstream 7344 true Chr07: 54811940-54819283 Eucalyptus grandis
Eucgr.G03433 5.0kb downstream 5.0kb downstream 5000 false Chr07: 54814284-54819283 Eucalyptus grandis
Eucgr.G03433 10.0kb upstream 10.0kb upstream 12344 true Chr07: 54801940-54814283 Eucalyptus grandis
Eucgr.G03433 10.0kb upstream 10.0kb upstream 10000 false Chr07: 54801940-54811939 Eucalyptus grandis
Eucgr.G03433 10.0kb downstream 10.0kb downstream 12344 true Chr07: 54811940-54824283 Eucalyptus grandis
Eucgr.G03433 10.0kb downstream 10.0kb downstream 10000 false Chr07: 54814284-54824283 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027594 5273 Angiosperm View MSA
124052393 5270 Rosid View MSA
123752499 5271 Pentapetalae View MSA
122798658 5272 Eudicot View MSA
121348601 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.00718 0.0 4.86472   Low
cufflinks 1.60459 0.0 6.23112    
cufflinks 1.32176 0.0 5.63286    
cufflinks 4.19382 0.0 13.2785    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.36532 0.0 16.2007   High

0 Strain