Gene : Eucgr.G03402 E. grandis v2.0
Defline:  (1 of 1) PTHR12452 - 42-9-9 PROTEIN-RELATED Genomic Order:  2839
Name:  ? Eucgr.G03402 Secondary Identifier:  ? PAC:32071578
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03402 0.5kb upstream 0.5kb upstream 2506 true Chr07: 54562013-54564518 Eucalyptus grandis
Eucgr.G03402 0.5kb upstream 0.5kb upstream 500 false Chr07: 54564019-54564518 Eucalyptus grandis
Eucgr.G03402 0.5kb downstream 0.5kb downstream 2506 true Chr07: 54561513-54564018 Eucalyptus grandis
Eucgr.G03402 0.5kb downstream 0.5kb downstream 500 false Chr07: 54561513-54562012 Eucalyptus grandis
Eucgr.G03402 1.0kb upstream 1.0kb upstream 3006 true Chr07: 54562013-54565018 Eucalyptus grandis
Eucgr.G03402 1.0kb upstream 1.0kb upstream 1000 false Chr07: 54564019-54565018 Eucalyptus grandis
Eucgr.G03402 1.0kb downstream 1.0kb downstream 3006 true Chr07: 54561013-54564018 Eucalyptus grandis
Eucgr.G03402 1.0kb downstream 1.0kb downstream 1000 false Chr07: 54561013-54562012 Eucalyptus grandis
Eucgr.G03402 2.0kb upstream 2.0kb upstream 4006 true Chr07: 54562013-54566018 Eucalyptus grandis
Eucgr.G03402 2.0kb upstream 2.0kb upstream 2000 false Chr07: 54564019-54566018 Eucalyptus grandis
Eucgr.G03402 2.0kb downstream 2.0kb downstream 4006 true Chr07: 54560013-54564018 Eucalyptus grandis
Eucgr.G03402 2.0kb downstream 2.0kb downstream 2000 false Chr07: 54560013-54562012 Eucalyptus grandis
Eucgr.G03402 5.0kb upstream 5.0kb upstream 7006 true Chr07: 54562013-54569018 Eucalyptus grandis
Eucgr.G03402 5.0kb upstream 5.0kb upstream 5000 false Chr07: 54564019-54569018 Eucalyptus grandis
Eucgr.G03402 5.0kb downstream 5.0kb downstream 7006 true Chr07: 54557013-54564018 Eucalyptus grandis
Eucgr.G03402 5.0kb downstream 5.0kb downstream 5000 false Chr07: 54557013-54562012 Eucalyptus grandis
Eucgr.G03402 10.0kb upstream 10.0kb upstream 12006 true Chr07: 54562013-54574018 Eucalyptus grandis
Eucgr.G03402 10.0kb upstream 10.0kb upstream 10000 false Chr07: 54564019-54574018 Eucalyptus grandis
Eucgr.G03402 10.0kb downstream 10.0kb downstream 12006 true Chr07: 54552013-54564018 Eucalyptus grandis
Eucgr.G03402 10.0kb downstream 10.0kb downstream 10000 false Chr07: 54552013-54562012 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062301 5270 Rosid View MSA
123739980 5271 Pentapetalae View MSA
122791634 5272 Eudicot View MSA
122046977 5273 Angiosperm View MSA
121346988 5274 Embryophyte View MSA
123427976 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.5309 0.0 103.879 High High
cufflinks 35.7175 0.0 80.7027    
cufflinks 32.312 0.0 73.5078 High Low
cufflinks 41.2556 0.0 92.6242 High  
cufflinks 44.662 0.0 99.8682 High  
cufflinks 31.6553 0.0 71.8777   Low

0 Strain