Gene : Eucgr.G03374 E. grandis v2.0
Defline:  (1 of 2) PTHR10543:SF37 - CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 Genomic Order:  2814
Name:  ? Eucgr.G03374 Secondary Identifier:  ? PAC:32070463
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03374 0.5kb upstream 0.5kb upstream 6102 true Chr07: 54337063-54343164 Eucalyptus grandis
Eucgr.G03374 0.5kb upstream 0.5kb upstream 500 false Chr07: 54337063-54337562 Eucalyptus grandis
Eucgr.G03374 0.5kb downstream 0.5kb downstream 6102 true Chr07: 54337563-54343664 Eucalyptus grandis
Eucgr.G03374 0.5kb downstream 0.5kb downstream 500 false Chr07: 54343165-54343664 Eucalyptus grandis
Eucgr.G03374 1.0kb upstream 1.0kb upstream 6602 true Chr07: 54336563-54343164 Eucalyptus grandis
Eucgr.G03374 1.0kb upstream 1.0kb upstream 1000 false Chr07: 54336563-54337562 Eucalyptus grandis
Eucgr.G03374 1.0kb downstream 1.0kb downstream 6602 true Chr07: 54337563-54344164 Eucalyptus grandis
Eucgr.G03374 1.0kb downstream 1.0kb downstream 1000 false Chr07: 54343165-54344164 Eucalyptus grandis
Eucgr.G03374 2.0kb upstream 2.0kb upstream 7602 true Chr07: 54335563-54343164 Eucalyptus grandis
Eucgr.G03374 2.0kb upstream 2.0kb upstream 2000 false Chr07: 54335563-54337562 Eucalyptus grandis
Eucgr.G03374 2.0kb downstream 2.0kb downstream 7602 true Chr07: 54337563-54345164 Eucalyptus grandis
Eucgr.G03374 2.0kb downstream 2.0kb downstream 2000 false Chr07: 54343165-54345164 Eucalyptus grandis
Eucgr.G03374 5.0kb upstream 5.0kb upstream 10602 true Chr07: 54332563-54343164 Eucalyptus grandis
Eucgr.G03374 5.0kb upstream 5.0kb upstream 5000 false Chr07: 54332563-54337562 Eucalyptus grandis
Eucgr.G03374 5.0kb downstream 5.0kb downstream 10602 true Chr07: 54337563-54348164 Eucalyptus grandis
Eucgr.G03374 5.0kb downstream 5.0kb downstream 5000 false Chr07: 54343165-54348164 Eucalyptus grandis
Eucgr.G03374 10.0kb upstream 10.0kb upstream 15602 true Chr07: 54327563-54343164 Eucalyptus grandis
Eucgr.G03374 10.0kb upstream 10.0kb upstream 10000 false Chr07: 54327563-54337562 Eucalyptus grandis
Eucgr.G03374 10.0kb downstream 10.0kb downstream 15602 true Chr07: 54337563-54353164 Eucalyptus grandis
Eucgr.G03374 10.0kb downstream 10.0kb downstream 10000 false Chr07: 54343165-54353164 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065010 5270 Rosid View MSA
123749061 5271 Pentapetalae View MSA
122787138 5272 Eudicot View MSA
122045403 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.2585 0.0 125.831 High  
cufflinks 24.5458 0.0 55.69    
cufflinks 52.129 0.0 152.256 High  
cufflinks 9.95376 0.0 23.008   Low
cufflinks 14.7329 0.0 33.0494    
cufflinks 104.15 0.0 247.977 High High

0 Strain