Gene : Eucgr.G03380 E. grandis v2.0
Defline:  (1 of 2) PTHR13301//PTHR13301:SF64 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  2819
Name:  ? Eucgr.G03380 Secondary Identifier:  ? PAC:32069952
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1001 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03380 0.5kb upstream 0.5kb upstream 9004 true Chr07: 54376368-54385371 Eucalyptus grandis
Eucgr.G03380 0.5kb upstream 0.5kb upstream 500 false Chr07: 54376368-54376867 Eucalyptus grandis
Eucgr.G03380 0.5kb downstream 0.5kb downstream 9004 true Chr07: 54376868-54385871 Eucalyptus grandis
Eucgr.G03380 0.5kb downstream 0.5kb downstream 500 false Chr07: 54385372-54385871 Eucalyptus grandis
Eucgr.G03380 1.0kb upstream 1.0kb upstream 9504 true Chr07: 54375868-54385371 Eucalyptus grandis
Eucgr.G03380 1.0kb upstream 1.0kb upstream 1000 false Chr07: 54375868-54376867 Eucalyptus grandis
Eucgr.G03380 1.0kb downstream 1.0kb downstream 9504 true Chr07: 54376868-54386371 Eucalyptus grandis
Eucgr.G03380 1.0kb downstream 1.0kb downstream 1000 false Chr07: 54385372-54386371 Eucalyptus grandis
Eucgr.G03380 2.0kb upstream 2.0kb upstream 10504 true Chr07: 54374868-54385371 Eucalyptus grandis
Eucgr.G03380 2.0kb upstream 2.0kb upstream 2000 false Chr07: 54374868-54376867 Eucalyptus grandis
Eucgr.G03380 2.0kb downstream 2.0kb downstream 10504 true Chr07: 54376868-54387371 Eucalyptus grandis
Eucgr.G03380 2.0kb downstream 2.0kb downstream 2000 false Chr07: 54385372-54387371 Eucalyptus grandis
Eucgr.G03380 5.0kb upstream 5.0kb upstream 13504 true Chr07: 54371868-54385371 Eucalyptus grandis
Eucgr.G03380 5.0kb upstream 5.0kb upstream 5000 false Chr07: 54371868-54376867 Eucalyptus grandis
Eucgr.G03380 5.0kb downstream 5.0kb downstream 13504 true Chr07: 54376868-54390371 Eucalyptus grandis
Eucgr.G03380 5.0kb downstream 5.0kb downstream 5000 false Chr07: 54385372-54390371 Eucalyptus grandis
Eucgr.G03380 10.0kb upstream 10.0kb upstream 18504 true Chr07: 54366868-54385371 Eucalyptus grandis
Eucgr.G03380 10.0kb upstream 10.0kb upstream 10000 false Chr07: 54366868-54376867 Eucalyptus grandis
Eucgr.G03380 10.0kb downstream 10.0kb downstream 18504 true Chr07: 54376868-54395371 Eucalyptus grandis
Eucgr.G03380 10.0kb downstream 10.0kb downstream 10000 false Chr07: 54385372-54395371 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.0347 0.0 194.03 High  
cufflinks 73.7856 0.0 215.898 High  
cufflinks 64.0044 0.0 180.66 High  
cufflinks 160.636 0.0 490.567 High High
cufflinks 90.1485 0.0 273.492 High  
cufflinks 86.8444 0.0 263.153 High  

0 Strain