Gene : Eucgr.G03360 E. grandis v2.0
Defline:  (1 of 235) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2801
Name:  ? Eucgr.G03360 Secondary Identifier:  ? PAC:32073081
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03360 0.5kb upstream 0.5kb upstream 4363 true Chr07: 54246517-54250879 Eucalyptus grandis
Eucgr.G03360 0.5kb upstream 0.5kb upstream 500 false Chr07: 54250380-54250879 Eucalyptus grandis
Eucgr.G03360 0.5kb downstream 0.5kb downstream 4363 true Chr07: 54246017-54250379 Eucalyptus grandis
Eucgr.G03360 0.5kb downstream 0.5kb downstream 500 false Chr07: 54246017-54246516 Eucalyptus grandis
Eucgr.G03360 1.0kb upstream 1.0kb upstream 4863 true Chr07: 54246517-54251379 Eucalyptus grandis
Eucgr.G03360 1.0kb upstream 1.0kb upstream 1000 false Chr07: 54250380-54251379 Eucalyptus grandis
Eucgr.G03360 1.0kb downstream 1.0kb downstream 4863 true Chr07: 54245517-54250379 Eucalyptus grandis
Eucgr.G03360 1.0kb downstream 1.0kb downstream 1000 false Chr07: 54245517-54246516 Eucalyptus grandis
Eucgr.G03360 2.0kb upstream 2.0kb upstream 5863 true Chr07: 54246517-54252379 Eucalyptus grandis
Eucgr.G03360 2.0kb upstream 2.0kb upstream 2000 false Chr07: 54250380-54252379 Eucalyptus grandis
Eucgr.G03360 2.0kb downstream 2.0kb downstream 5863 true Chr07: 54244517-54250379 Eucalyptus grandis
Eucgr.G03360 2.0kb downstream 2.0kb downstream 2000 false Chr07: 54244517-54246516 Eucalyptus grandis
Eucgr.G03360 5.0kb upstream 5.0kb upstream 8863 true Chr07: 54246517-54255379 Eucalyptus grandis
Eucgr.G03360 5.0kb upstream 5.0kb upstream 5000 false Chr07: 54250380-54255379 Eucalyptus grandis
Eucgr.G03360 5.0kb downstream 5.0kb downstream 8863 true Chr07: 54241517-54250379 Eucalyptus grandis
Eucgr.G03360 5.0kb downstream 5.0kb downstream 5000 false Chr07: 54241517-54246516 Eucalyptus grandis
Eucgr.G03360 10.0kb upstream 10.0kb upstream 13863 true Chr07: 54246517-54260379 Eucalyptus grandis
Eucgr.G03360 10.0kb upstream 10.0kb upstream 10000 false Chr07: 54250380-54260379 Eucalyptus grandis
Eucgr.G03360 10.0kb downstream 10.0kb downstream 13863 true Chr07: 54236517-54250379 Eucalyptus grandis
Eucgr.G03360 10.0kb downstream 10.0kb downstream 10000 false Chr07: 54236517-54246516 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060604 5270 Rosid View MSA
123748813 5271 Pentapetalae View MSA
122787723 5272 Eudicot View MSA
122046252 5273 Angiosperm View MSA
121346998 5274 Embryophyte View MSA
123380477 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.18451 0.0 3.45818   Low
cufflinks 4.65032 0.0 11.0316    
cufflinks 2.03215 0.0 6.89015    
cufflinks 10.7719 0.0 27.8026   High
cufflinks 2.97571 0.0 10.717    
cufflinks 1.51564 0.0 4.29886    

0 Strain