Gene : Eucgr.H00653 E. grandis v2.0
Defline:  (1 of 6) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  582
Name:  ? Eucgr.H00653 Secondary Identifier:  ? PAC:32045452
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00653 0.5kb upstream 0.5kb upstream 6103 true Chr08: 8998223-9004325 Eucalyptus grandis
Eucgr.H00653 0.5kb upstream 0.5kb upstream 500 false Chr08: 9003826-9004325 Eucalyptus grandis
Eucgr.H00653 0.5kb downstream 0.5kb downstream 6103 true Chr08: 8997723-9003825 Eucalyptus grandis
Eucgr.H00653 0.5kb downstream 0.5kb downstream 500 false Chr08: 8997723-8998222 Eucalyptus grandis
Eucgr.H00653 1.0kb upstream 1.0kb upstream 6603 true Chr08: 8998223-9004825 Eucalyptus grandis
Eucgr.H00653 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9003826-9004825 Eucalyptus grandis
Eucgr.H00653 1.0kb downstream 1.0kb downstream 6603 true Chr08: 8997223-9003825 Eucalyptus grandis
Eucgr.H00653 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8997223-8998222 Eucalyptus grandis
Eucgr.H00653 2.0kb upstream 2.0kb upstream 7603 true Chr08: 8998223-9005825 Eucalyptus grandis
Eucgr.H00653 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9003826-9005825 Eucalyptus grandis
Eucgr.H00653 2.0kb downstream 2.0kb downstream 7603 true Chr08: 8996223-9003825 Eucalyptus grandis
Eucgr.H00653 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8996223-8998222 Eucalyptus grandis
Eucgr.H00653 5.0kb upstream 5.0kb upstream 10603 true Chr08: 8998223-9008825 Eucalyptus grandis
Eucgr.H00653 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9003826-9008825 Eucalyptus grandis
Eucgr.H00653 5.0kb downstream 5.0kb downstream 10603 true Chr08: 8993223-9003825 Eucalyptus grandis
Eucgr.H00653 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8993223-8998222 Eucalyptus grandis
Eucgr.H00653 10.0kb upstream 10.0kb upstream 15603 true Chr08: 8998223-9013825 Eucalyptus grandis
Eucgr.H00653 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9003826-9013825 Eucalyptus grandis
Eucgr.H00653 10.0kb downstream 10.0kb downstream 15603 true Chr08: 8988223-9003825 Eucalyptus grandis
Eucgr.H00653 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8988223-8998222 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070765 5270 Rosid View MSA
123742721 5271 Pentapetalae View MSA
122770367 5272 Eudicot View MSA
122049014 5273 Angiosperm View MSA
121311208 5274 Embryophyte View MSA
123348533 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.991611 0.0 2.65536   Low
cufflinks 4.83695 0.0 11.0618   High
cufflinks 2.39434 0.0 5.83484    
cufflinks 4.07735 0.0 9.42881    
cufflinks 3.69673 0.0 8.65928    
cufflinks 2.24289 0.0 5.57448    

0 Strain