Gene : Eucgr.H00644 E. grandis v2.0
Defline:  (1 of 1) PTHR33925:SF2 - PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC Genomic Order:  573
Name:  ? Eucgr.H00644 Secondary Identifier:  ? PAC:32041669
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00644 0.5kb upstream 0.5kb upstream 6742 true Chr08: 8886593-8893334 Eucalyptus grandis
Eucgr.H00644 0.5kb upstream 0.5kb upstream 500 false Chr08: 8892835-8893334 Eucalyptus grandis
Eucgr.H00644 0.5kb downstream 0.5kb downstream 6742 true Chr08: 8886093-8892834 Eucalyptus grandis
Eucgr.H00644 0.5kb downstream 0.5kb downstream 500 false Chr08: 8886093-8886592 Eucalyptus grandis
Eucgr.H00644 1.0kb upstream 1.0kb upstream 7242 true Chr08: 8886593-8893834 Eucalyptus grandis
Eucgr.H00644 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8892835-8893834 Eucalyptus grandis
Eucgr.H00644 1.0kb downstream 1.0kb downstream 7242 true Chr08: 8885593-8892834 Eucalyptus grandis
Eucgr.H00644 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8885593-8886592 Eucalyptus grandis
Eucgr.H00644 2.0kb upstream 2.0kb upstream 8242 true Chr08: 8886593-8894834 Eucalyptus grandis
Eucgr.H00644 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8892835-8894834 Eucalyptus grandis
Eucgr.H00644 2.0kb downstream 2.0kb downstream 8242 true Chr08: 8884593-8892834 Eucalyptus grandis
Eucgr.H00644 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8884593-8886592 Eucalyptus grandis
Eucgr.H00644 5.0kb upstream 5.0kb upstream 11242 true Chr08: 8886593-8897834 Eucalyptus grandis
Eucgr.H00644 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8892835-8897834 Eucalyptus grandis
Eucgr.H00644 5.0kb downstream 5.0kb downstream 11242 true Chr08: 8881593-8892834 Eucalyptus grandis
Eucgr.H00644 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8881593-8886592 Eucalyptus grandis
Eucgr.H00644 10.0kb upstream 10.0kb upstream 16242 true Chr08: 8886593-8902834 Eucalyptus grandis
Eucgr.H00644 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8892835-8902834 Eucalyptus grandis
Eucgr.H00644 10.0kb downstream 10.0kb downstream 16242 true Chr08: 8876593-8892834 Eucalyptus grandis
Eucgr.H00644 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8876593-8886592 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060775 5270 Rosid View MSA
123739322 5271 Pentapetalae View MSA
122788542 5272 Eudicot View MSA
122051144 5273 Angiosperm View MSA
121351206 5274 Embryophyte View MSA
123426631 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3082 0.0 23.4198    
cufflinks 3.26046 0.0 7.89856   Low
cufflinks 11.0034 0.0 24.8612    
cufflinks 5.98467 0.0 14.3946    
cufflinks 4.25577 0.0 10.0291    
cufflinks 14.5757 0.0 36.4309   High

0 Strain