Gene : Eucgr.H00617 E. grandis v2.0
Defline:  (1 of 1) PTHR22778:SF18 - RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 8, CHLOROPLASTIC Genomic Order:  551
Name:  ? Eucgr.H00617 Secondary Identifier:  ? PAC:32042065
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00617 0.5kb upstream 0.5kb upstream 6081 true Chr08: 8614115-8620195 Eucalyptus grandis
Eucgr.H00617 0.5kb upstream 0.5kb upstream 500 false Chr08: 8619696-8620195 Eucalyptus grandis
Eucgr.H00617 0.5kb downstream 0.5kb downstream 6081 true Chr08: 8613615-8619695 Eucalyptus grandis
Eucgr.H00617 0.5kb downstream 0.5kb downstream 500 false Chr08: 8613615-8614114 Eucalyptus grandis
Eucgr.H00617 1.0kb upstream 1.0kb upstream 6581 true Chr08: 8614115-8620695 Eucalyptus grandis
Eucgr.H00617 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8619696-8620695 Eucalyptus grandis
Eucgr.H00617 1.0kb downstream 1.0kb downstream 6581 true Chr08: 8613115-8619695 Eucalyptus grandis
Eucgr.H00617 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8613115-8614114 Eucalyptus grandis
Eucgr.H00617 2.0kb upstream 2.0kb upstream 7581 true Chr08: 8614115-8621695 Eucalyptus grandis
Eucgr.H00617 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8619696-8621695 Eucalyptus grandis
Eucgr.H00617 2.0kb downstream 2.0kb downstream 7581 true Chr08: 8612115-8619695 Eucalyptus grandis
Eucgr.H00617 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8612115-8614114 Eucalyptus grandis
Eucgr.H00617 5.0kb upstream 5.0kb upstream 10581 true Chr08: 8614115-8624695 Eucalyptus grandis
Eucgr.H00617 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8619696-8624695 Eucalyptus grandis
Eucgr.H00617 5.0kb downstream 5.0kb downstream 10581 true Chr08: 8609115-8619695 Eucalyptus grandis
Eucgr.H00617 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8609115-8614114 Eucalyptus grandis
Eucgr.H00617 10.0kb upstream 10.0kb upstream 15581 true Chr08: 8614115-8629695 Eucalyptus grandis
Eucgr.H00617 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8619696-8629695 Eucalyptus grandis
Eucgr.H00617 10.0kb downstream 10.0kb downstream 15581 true Chr08: 8604115-8619695 Eucalyptus grandis
Eucgr.H00617 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8604115-8614114 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065740 5270 Rosid View MSA
123736994 5271 Pentapetalae View MSA
122787979 5272 Eudicot View MSA
122046672 5273 Angiosperm View MSA
121346147 5274 Embryophyte View MSA
123427771 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.90566 0.0 21.164    
cufflinks 2.66812 0.0 7.19727    
cufflinks 5.29074 0.0 15.8933    
cufflinks 0.647327 0.0 2.16603   Low
cufflinks 3.03259 0.0 7.91024    
cufflinks 8.13549 0.0 18.7478    

0 Strain