Gene : Eucgr.H00592 E. grandis v2.0
Defline:  (1 of 1) PTHR13471 - TETRATRICOPEPTIDE-LIKE HELICAL Genomic Order:  529
Name:  ? Eucgr.H00592 Secondary Identifier:  ? PAC:32043075
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00592 0.5kb upstream 0.5kb upstream 10968 true Chr08: 8359079-8370046 Eucalyptus grandis
Eucgr.H00592 0.5kb upstream 0.5kb upstream 500 false Chr08: 8359079-8359578 Eucalyptus grandis
Eucgr.H00592 0.5kb downstream 0.5kb downstream 10968 true Chr08: 8359579-8370546 Eucalyptus grandis
Eucgr.H00592 0.5kb downstream 0.5kb downstream 500 false Chr08: 8370047-8370546 Eucalyptus grandis
Eucgr.H00592 1.0kb upstream 1.0kb upstream 11468 true Chr08: 8358579-8370046 Eucalyptus grandis
Eucgr.H00592 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8358579-8359578 Eucalyptus grandis
Eucgr.H00592 1.0kb downstream 1.0kb downstream 11468 true Chr08: 8359579-8371046 Eucalyptus grandis
Eucgr.H00592 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8370047-8371046 Eucalyptus grandis
Eucgr.H00592 2.0kb upstream 2.0kb upstream 12468 true Chr08: 8357579-8370046 Eucalyptus grandis
Eucgr.H00592 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8357579-8359578 Eucalyptus grandis
Eucgr.H00592 2.0kb downstream 2.0kb downstream 12468 true Chr08: 8359579-8372046 Eucalyptus grandis
Eucgr.H00592 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8370047-8372046 Eucalyptus grandis
Eucgr.H00592 5.0kb upstream 5.0kb upstream 15468 true Chr08: 8354579-8370046 Eucalyptus grandis
Eucgr.H00592 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8354579-8359578 Eucalyptus grandis
Eucgr.H00592 5.0kb downstream 5.0kb downstream 15468 true Chr08: 8359579-8375046 Eucalyptus grandis
Eucgr.H00592 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8370047-8375046 Eucalyptus grandis
Eucgr.H00592 10.0kb upstream 10.0kb upstream 20468 true Chr08: 8349579-8370046 Eucalyptus grandis
Eucgr.H00592 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8349579-8359578 Eucalyptus grandis
Eucgr.H00592 10.0kb downstream 10.0kb downstream 20468 true Chr08: 8359579-8380046 Eucalyptus grandis
Eucgr.H00592 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8370047-8380046 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026294 5273 Angiosperm View MSA
124063605 5270 Rosid View MSA
123738966 5271 Pentapetalae View MSA
122791971 5272 Eudicot View MSA
121345312 5274 Embryophyte View MSA
123423930 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.51451 0.0 10.6152    
cufflinks 8.45737 0.0 19.0462   High
cufflinks 4.08898 0.0 9.70743    
cufflinks 4.63744 0.0 10.7204    
cufflinks 3.80839 0.0 9.2539    
cufflinks 6.34466 0.0 14.5967    

0 Strain