Gene : Eucgr.H00555 E. grandis v2.0
Defline:  (1 of 1) PTHR10217//PTHR10217:SF514 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL Genomic Order:  495
Name:  ? Eucgr.H00555 Secondary Identifier:  ? PAC:32043911
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00555 0.5kb upstream 0.5kb upstream 8216 true Chr08: 8009664-8017879 Eucalyptus grandis
Eucgr.H00555 0.5kb upstream 0.5kb upstream 500 false Chr08: 8009664-8010163 Eucalyptus grandis
Eucgr.H00555 0.5kb downstream 0.5kb downstream 8216 true Chr08: 8010164-8018379 Eucalyptus grandis
Eucgr.H00555 0.5kb downstream 0.5kb downstream 500 false Chr08: 8017880-8018379 Eucalyptus grandis
Eucgr.H00555 1.0kb upstream 1.0kb upstream 8716 true Chr08: 8009164-8017879 Eucalyptus grandis
Eucgr.H00555 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8009164-8010163 Eucalyptus grandis
Eucgr.H00555 1.0kb downstream 1.0kb downstream 8716 true Chr08: 8010164-8018879 Eucalyptus grandis
Eucgr.H00555 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8017880-8018879 Eucalyptus grandis
Eucgr.H00555 2.0kb upstream 2.0kb upstream 9716 true Chr08: 8008164-8017879 Eucalyptus grandis
Eucgr.H00555 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8008164-8010163 Eucalyptus grandis
Eucgr.H00555 2.0kb downstream 2.0kb downstream 9716 true Chr08: 8010164-8019879 Eucalyptus grandis
Eucgr.H00555 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8017880-8019879 Eucalyptus grandis
Eucgr.H00555 5.0kb upstream 5.0kb upstream 12716 true Chr08: 8005164-8017879 Eucalyptus grandis
Eucgr.H00555 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8005164-8010163 Eucalyptus grandis
Eucgr.H00555 5.0kb downstream 5.0kb downstream 12716 true Chr08: 8010164-8022879 Eucalyptus grandis
Eucgr.H00555 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8017880-8022879 Eucalyptus grandis
Eucgr.H00555 10.0kb upstream 10.0kb upstream 17716 true Chr08: 8000164-8017879 Eucalyptus grandis
Eucgr.H00555 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8000164-8010163 Eucalyptus grandis
Eucgr.H00555 10.0kb downstream 10.0kb downstream 17716 true Chr08: 8010164-8027879 Eucalyptus grandis
Eucgr.H00555 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8017880-8027879 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071952 5270 Rosid View MSA
123747890 5271 Pentapetalae View MSA
122792503 5272 Eudicot View MSA
122045299 5273 Angiosperm View MSA
121310431 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5563 0.0 30.0991    
cufflinks 2.505 0.0 6.29209   Low
cufflinks 6.35373 0.0 14.6489    
cufflinks 3.03622 0.0 7.48378   Low
cufflinks 26.2607 0.0 58.2336   High
cufflinks 13.8768 0.0 30.7924    

0 Strain