Gene : Eucgr.H00558 E. grandis v2.0
Defline:  (1 of 6) PF05542 - Protein of unknown function (DUF760) (DUF760) Genomic Order:  498
Name:  ? Eucgr.H00558 Secondary Identifier:  ? PAC:32044592
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00558 0.5kb upstream 0.5kb upstream 3749 true Chr08: 8042315-8046063 Eucalyptus grandis
Eucgr.H00558 0.5kb upstream 0.5kb upstream 500 false Chr08: 8042315-8042814 Eucalyptus grandis
Eucgr.H00558 0.5kb downstream 0.5kb downstream 3749 true Chr08: 8042815-8046563 Eucalyptus grandis
Eucgr.H00558 0.5kb downstream 0.5kb downstream 500 false Chr08: 8046064-8046563 Eucalyptus grandis
Eucgr.H00558 1.0kb upstream 1.0kb upstream 4249 true Chr08: 8041815-8046063 Eucalyptus grandis
Eucgr.H00558 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8041815-8042814 Eucalyptus grandis
Eucgr.H00558 1.0kb downstream 1.0kb downstream 4249 true Chr08: 8042815-8047063 Eucalyptus grandis
Eucgr.H00558 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8046064-8047063 Eucalyptus grandis
Eucgr.H00558 2.0kb upstream 2.0kb upstream 5249 true Chr08: 8040815-8046063 Eucalyptus grandis
Eucgr.H00558 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8040815-8042814 Eucalyptus grandis
Eucgr.H00558 2.0kb downstream 2.0kb downstream 5249 true Chr08: 8042815-8048063 Eucalyptus grandis
Eucgr.H00558 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8046064-8048063 Eucalyptus grandis
Eucgr.H00558 5.0kb upstream 5.0kb upstream 8249 true Chr08: 8037815-8046063 Eucalyptus grandis
Eucgr.H00558 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8037815-8042814 Eucalyptus grandis
Eucgr.H00558 5.0kb downstream 5.0kb downstream 8249 true Chr08: 8042815-8051063 Eucalyptus grandis
Eucgr.H00558 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8046064-8051063 Eucalyptus grandis
Eucgr.H00558 10.0kb upstream 10.0kb upstream 13249 true Chr08: 8032815-8046063 Eucalyptus grandis
Eucgr.H00558 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8032815-8042814 Eucalyptus grandis
Eucgr.H00558 10.0kb downstream 10.0kb downstream 13249 true Chr08: 8042815-8056063 Eucalyptus grandis
Eucgr.H00558 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8046064-8056063 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062530 5270 Rosid View MSA
123743837 5271 Pentapetalae View MSA
122792166 5272 Eudicot View MSA
122045353 5273 Angiosperm View MSA
121310438 5274 Embryophyte View MSA
123428654 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 109.035 0.0 259.18 High  
cufflinks 177.204 0.0 446.555 High High
cufflinks 103.945 0.0 246.807 High  
cufflinks 139.776 0.0 343.622 High  
cufflinks 93.3392 0.0 219.223 High  
cufflinks 63.5212 0.0 144.389 High Low

0 Strain