Gene : Eucgr.H00541 E. grandis v2.0
Defline:  (1 of 1) 2.1.1.107 - Uroporphyrinogen-III C-methyltransferase / Uroporphyrinogen-III methyltransferase Genomic Order:  482
Name:  ? Eucgr.H00541 Secondary Identifier:  ? PAC:32041912
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00541 0.5kb upstream 0.5kb upstream 2818 true Chr08: 7773114-7775931 Eucalyptus grandis
Eucgr.H00541 0.5kb upstream 0.5kb upstream 500 false Chr08: 7775432-7775931 Eucalyptus grandis
Eucgr.H00541 0.5kb downstream 0.5kb downstream 2818 true Chr08: 7772614-7775431 Eucalyptus grandis
Eucgr.H00541 0.5kb downstream 0.5kb downstream 500 false Chr08: 7772614-7773113 Eucalyptus grandis
Eucgr.H00541 1.0kb upstream 1.0kb upstream 3318 true Chr08: 7773114-7776431 Eucalyptus grandis
Eucgr.H00541 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7775432-7776431 Eucalyptus grandis
Eucgr.H00541 1.0kb downstream 1.0kb downstream 3318 true Chr08: 7772114-7775431 Eucalyptus grandis
Eucgr.H00541 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7772114-7773113 Eucalyptus grandis
Eucgr.H00541 2.0kb upstream 2.0kb upstream 4318 true Chr08: 7773114-7777431 Eucalyptus grandis
Eucgr.H00541 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7775432-7777431 Eucalyptus grandis
Eucgr.H00541 2.0kb downstream 2.0kb downstream 4318 true Chr08: 7771114-7775431 Eucalyptus grandis
Eucgr.H00541 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7771114-7773113 Eucalyptus grandis
Eucgr.H00541 5.0kb upstream 5.0kb upstream 7318 true Chr08: 7773114-7780431 Eucalyptus grandis
Eucgr.H00541 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7775432-7780431 Eucalyptus grandis
Eucgr.H00541 5.0kb downstream 5.0kb downstream 7318 true Chr08: 7768114-7775431 Eucalyptus grandis
Eucgr.H00541 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7768114-7773113 Eucalyptus grandis
Eucgr.H00541 10.0kb upstream 10.0kb upstream 12318 true Chr08: 7773114-7785431 Eucalyptus grandis
Eucgr.H00541 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7775432-7785431 Eucalyptus grandis
Eucgr.H00541 10.0kb downstream 10.0kb downstream 12318 true Chr08: 7763114-7775431 Eucalyptus grandis
Eucgr.H00541 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7763114-7773113 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068811 5270 Rosid View MSA
123740285 5271 Pentapetalae View MSA
122785895 5272 Eudicot View MSA
122045431 5273 Angiosperm View MSA
121347676 5274 Embryophyte View MSA
123426668 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.06371 0.0 10.6492    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.44962 0.0 9.22674    
cufflinks 0.595588 0.0 1.93707   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.27356 0.0 13.3785    

0 Strain