Gene : Eucgr.H00506 E. grandis v2.0
Defline:  (1 of 1) PTHR11817:SF14 - PLASTIDIAL PYRUVATE KINASE 1, CHLOROPLASTIC Genomic Order:  458
Name:  ? Eucgr.H00506 Secondary Identifier:  ? PAC:32043762
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ANAEROFRUCAT-PWY Eucalyptus grandis pathologic  
Egrandis ANAGLYCOLYSIS-PWY Eucalyptus grandis pathologic  
Egrandis PWY-1042 Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PWY-5723 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00506 0.5kb upstream 0.5kb upstream 4815 true Chr08: 7122930-7127744 Eucalyptus grandis
Eucgr.H00506 0.5kb upstream 0.5kb upstream 500 false Chr08: 7127245-7127744 Eucalyptus grandis
Eucgr.H00506 0.5kb downstream 0.5kb downstream 4815 true Chr08: 7122430-7127244 Eucalyptus grandis
Eucgr.H00506 0.5kb downstream 0.5kb downstream 500 false Chr08: 7122430-7122929 Eucalyptus grandis
Eucgr.H00506 1.0kb upstream 1.0kb upstream 5315 true Chr08: 7122930-7128244 Eucalyptus grandis
Eucgr.H00506 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7127245-7128244 Eucalyptus grandis
Eucgr.H00506 1.0kb downstream 1.0kb downstream 5315 true Chr08: 7121930-7127244 Eucalyptus grandis
Eucgr.H00506 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7121930-7122929 Eucalyptus grandis
Eucgr.H00506 2.0kb upstream 2.0kb upstream 6315 true Chr08: 7122930-7129244 Eucalyptus grandis
Eucgr.H00506 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7127245-7129244 Eucalyptus grandis
Eucgr.H00506 2.0kb downstream 2.0kb downstream 6315 true Chr08: 7120930-7127244 Eucalyptus grandis
Eucgr.H00506 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7120930-7122929 Eucalyptus grandis
Eucgr.H00506 5.0kb upstream 5.0kb upstream 9315 true Chr08: 7122930-7132244 Eucalyptus grandis
Eucgr.H00506 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7127245-7132244 Eucalyptus grandis
Eucgr.H00506 5.0kb downstream 5.0kb downstream 9315 true Chr08: 7117930-7127244 Eucalyptus grandis
Eucgr.H00506 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7117930-7122929 Eucalyptus grandis
Eucgr.H00506 10.0kb upstream 10.0kb upstream 14315 true Chr08: 7122930-7137244 Eucalyptus grandis
Eucgr.H00506 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7127245-7137244 Eucalyptus grandis
Eucgr.H00506 10.0kb downstream 10.0kb downstream 14315 true Chr08: 7112930-7127244 Eucalyptus grandis
Eucgr.H00506 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7112930-7122929 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069917 5270 Rosid View MSA
123742502 5271 Pentapetalae View MSA
122795154 5272 Eudicot View MSA
122047085 5273 Angiosperm View MSA
121351198 5274 Embryophyte View MSA
123423773 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.7962 0.0 41.6703    
cufflinks 13.2839 0.0 29.7173   Low
cufflinks 22.8558 0.0 50.557   High
cufflinks 15.9545 0.0 35.4789    
cufflinks 20.3164 0.0 44.999    
cufflinks 15.8935 0.0 35.3661    

0 Strain