Gene : Eucgr.H00461 E. grandis v2.0
Defline:  (1 of 2) PTHR22847//PTHR22847:SF453 - WD40 REPEAT PROTEIN Genomic Order:  184
Name:  ? Eucgr.H00461 Secondary Identifier:  ? PAC:32041935
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00461 0.5kb upstream 0.5kb upstream 5097 true Chr08: 2845337-2850433 Eucalyptus grandis
Eucgr.H00461 0.5kb upstream 0.5kb upstream 500 false Chr08: 2845337-2845836 Eucalyptus grandis
Eucgr.H00461 0.5kb downstream 0.5kb downstream 5097 true Chr08: 2845837-2850933 Eucalyptus grandis
Eucgr.H00461 0.5kb downstream 0.5kb downstream 500 false Chr08: 2850434-2850933 Eucalyptus grandis
Eucgr.H00461 1.0kb upstream 1.0kb upstream 5597 true Chr08: 2844837-2850433 Eucalyptus grandis
Eucgr.H00461 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2844837-2845836 Eucalyptus grandis
Eucgr.H00461 1.0kb downstream 1.0kb downstream 5597 true Chr08: 2845837-2851433 Eucalyptus grandis
Eucgr.H00461 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2850434-2851433 Eucalyptus grandis
Eucgr.H00461 2.0kb upstream 2.0kb upstream 6597 true Chr08: 2843837-2850433 Eucalyptus grandis
Eucgr.H00461 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2843837-2845836 Eucalyptus grandis
Eucgr.H00461 2.0kb downstream 2.0kb downstream 6597 true Chr08: 2845837-2852433 Eucalyptus grandis
Eucgr.H00461 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2850434-2852433 Eucalyptus grandis
Eucgr.H00461 5.0kb upstream 5.0kb upstream 9597 true Chr08: 2840837-2850433 Eucalyptus grandis
Eucgr.H00461 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2840837-2845836 Eucalyptus grandis
Eucgr.H00461 5.0kb downstream 5.0kb downstream 9597 true Chr08: 2845837-2855433 Eucalyptus grandis
Eucgr.H00461 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2850434-2855433 Eucalyptus grandis
Eucgr.H00461 10.0kb upstream 10.0kb upstream 14597 true Chr08: 2835837-2850433 Eucalyptus grandis
Eucgr.H00461 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2835837-2845836 Eucalyptus grandis
Eucgr.H00461 10.0kb downstream 10.0kb downstream 14597 true Chr08: 2845837-2860433 Eucalyptus grandis
Eucgr.H00461 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2850434-2860433 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041408 5273 Angiosperm View MSA
124070552 5270 Rosid View MSA
123745758 5271 Pentapetalae View MSA
122795577 5272 Eudicot View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.31718 0.0 26.3696    
cufflinks 7.4989 0.0 17.2914    
cufflinks 9.15093 0.0 26.2309    
cufflinks 7.86798 0.0 22.4665    
cufflinks 27.1022 0.0 77.2825   High
cufflinks 10.5076 0.0 30.7946    

0 Strain