Gene : Eucgr.H00436 E. grandis v2.0
Defline:  (1 of 7) 2.3.2.15 - Glutathione gamma-glutamylcysteinyltransferase / Phytochelatin synthase Genomic Order:  166
Name:  ? Eucgr.H00436 Secondary Identifier:  ? PAC:32042449
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6745 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00436 0.5kb upstream 0.5kb upstream 8696 true Chr08: 2510468-2519163 Eucalyptus grandis
Eucgr.H00436 0.5kb upstream 0.5kb upstream 500 false Chr08: 2518664-2519163 Eucalyptus grandis
Eucgr.H00436 0.5kb downstream 0.5kb downstream 8696 true Chr08: 2509968-2518663 Eucalyptus grandis
Eucgr.H00436 0.5kb downstream 0.5kb downstream 500 false Chr08: 2509968-2510467 Eucalyptus grandis
Eucgr.H00436 1.0kb upstream 1.0kb upstream 9196 true Chr08: 2510468-2519663 Eucalyptus grandis
Eucgr.H00436 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2518664-2519663 Eucalyptus grandis
Eucgr.H00436 1.0kb downstream 1.0kb downstream 9196 true Chr08: 2509468-2518663 Eucalyptus grandis
Eucgr.H00436 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2509468-2510467 Eucalyptus grandis
Eucgr.H00436 2.0kb upstream 2.0kb upstream 10196 true Chr08: 2510468-2520663 Eucalyptus grandis
Eucgr.H00436 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2518664-2520663 Eucalyptus grandis
Eucgr.H00436 2.0kb downstream 2.0kb downstream 10196 true Chr08: 2508468-2518663 Eucalyptus grandis
Eucgr.H00436 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2508468-2510467 Eucalyptus grandis
Eucgr.H00436 5.0kb upstream 5.0kb upstream 13196 true Chr08: 2510468-2523663 Eucalyptus grandis
Eucgr.H00436 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2518664-2523663 Eucalyptus grandis
Eucgr.H00436 5.0kb downstream 5.0kb downstream 13196 true Chr08: 2505468-2518663 Eucalyptus grandis
Eucgr.H00436 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2505468-2510467 Eucalyptus grandis
Eucgr.H00436 10.0kb upstream 10.0kb upstream 18196 true Chr08: 2510468-2528663 Eucalyptus grandis
Eucgr.H00436 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2518664-2528663 Eucalyptus grandis
Eucgr.H00436 10.0kb downstream 10.0kb downstream 18196 true Chr08: 2500468-2518663 Eucalyptus grandis
Eucgr.H00436 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2500468-2510467 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068686 5270 Rosid View MSA
123741810 5271 Pentapetalae View MSA
122787952 5272 Eudicot View MSA
122042106 5273 Angiosperm View MSA
123429015 5275 Viridiplantae View MSA
121309923 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.3044 0.0 19.1566    
cufflinks 4.36203 0.0 10.5897   Low
cufflinks 7.81982 0.0 18.0687    
cufflinks 6.46022 0.0 15.1068    
cufflinks 10.3868 0.0 23.5414    
cufflinks 9.97704 0.0 22.8619    

0 Strain