Gene : Eucgr.H00454 E. grandis v2.0
Defline:  (1 of 4) PTHR13832:SF286 - PROTEIN PHOSPHATASE 2C 33-RELATED Genomic Order:  180
Name:  ? Eucgr.H00454 Secondary Identifier:  ? PAC:32040960
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00454 0.5kb upstream 0.5kb upstream 3921 true Chr08: 2745624-2749544 Eucalyptus grandis
Eucgr.H00454 0.5kb upstream 0.5kb upstream 500 false Chr08: 2749045-2749544 Eucalyptus grandis
Eucgr.H00454 0.5kb downstream 0.5kb downstream 3921 true Chr08: 2745124-2749044 Eucalyptus grandis
Eucgr.H00454 0.5kb downstream 0.5kb downstream 500 false Chr08: 2745124-2745623 Eucalyptus grandis
Eucgr.H00454 1.0kb upstream 1.0kb upstream 4421 true Chr08: 2745624-2750044 Eucalyptus grandis
Eucgr.H00454 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2749045-2750044 Eucalyptus grandis
Eucgr.H00454 1.0kb downstream 1.0kb downstream 4421 true Chr08: 2744624-2749044 Eucalyptus grandis
Eucgr.H00454 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2744624-2745623 Eucalyptus grandis
Eucgr.H00454 2.0kb upstream 2.0kb upstream 5421 true Chr08: 2745624-2751044 Eucalyptus grandis
Eucgr.H00454 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2749045-2751044 Eucalyptus grandis
Eucgr.H00454 2.0kb downstream 2.0kb downstream 5421 true Chr08: 2743624-2749044 Eucalyptus grandis
Eucgr.H00454 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2743624-2745623 Eucalyptus grandis
Eucgr.H00454 5.0kb upstream 5.0kb upstream 8421 true Chr08: 2745624-2754044 Eucalyptus grandis
Eucgr.H00454 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2749045-2754044 Eucalyptus grandis
Eucgr.H00454 5.0kb downstream 5.0kb downstream 8421 true Chr08: 2740624-2749044 Eucalyptus grandis
Eucgr.H00454 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2740624-2745623 Eucalyptus grandis
Eucgr.H00454 10.0kb upstream 10.0kb upstream 13421 true Chr08: 2745624-2759044 Eucalyptus grandis
Eucgr.H00454 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2749045-2759044 Eucalyptus grandis
Eucgr.H00454 10.0kb downstream 10.0kb downstream 13421 true Chr08: 2735624-2749044 Eucalyptus grandis
Eucgr.H00454 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2735624-2745623 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051240 5270 Rosid View MSA
123751353 5271 Pentapetalae View MSA
122793781 5272 Eudicot View MSA
122043983 5273 Angiosperm View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7025 0.0 27.4848    
cufflinks 11.3498 0.0 26.6498    
cufflinks 16.9979 0.0 38.7499    
cufflinks 44.341 0.0 98.0585 High High
cufflinks 7.53381 0.0 18.4219   Low
cufflinks 13.2958 0.0 30.9476    

0 Strain