Gene : Eucgr.H00412 E. grandis v2.0
Defline:  (1 of 6) PTHR13952:SF6 - U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 35 KDA PROTEIN Genomic Order:  144
Name:  ? Eucgr.H00412 Secondary Identifier:  ? PAC:32043922
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00412 0.5kb upstream 0.5kb upstream 6692 true Chr08: 2237819-2244510 Eucalyptus grandis
Eucgr.H00412 0.5kb upstream 0.5kb upstream 500 false Chr08: 2237819-2238318 Eucalyptus grandis
Eucgr.H00412 0.5kb downstream 0.5kb downstream 6692 true Chr08: 2238319-2245010 Eucalyptus grandis
Eucgr.H00412 0.5kb downstream 0.5kb downstream 500 false Chr08: 2244511-2245010 Eucalyptus grandis
Eucgr.H00412 1.0kb upstream 1.0kb upstream 7192 true Chr08: 2237319-2244510 Eucalyptus grandis
Eucgr.H00412 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2237319-2238318 Eucalyptus grandis
Eucgr.H00412 1.0kb downstream 1.0kb downstream 7192 true Chr08: 2238319-2245510 Eucalyptus grandis
Eucgr.H00412 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2244511-2245510 Eucalyptus grandis
Eucgr.H00412 2.0kb upstream 2.0kb upstream 8192 true Chr08: 2236319-2244510 Eucalyptus grandis
Eucgr.H00412 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2236319-2238318 Eucalyptus grandis
Eucgr.H00412 2.0kb downstream 2.0kb downstream 8192 true Chr08: 2238319-2246510 Eucalyptus grandis
Eucgr.H00412 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2244511-2246510 Eucalyptus grandis
Eucgr.H00412 5.0kb upstream 5.0kb upstream 11192 true Chr08: 2233319-2244510 Eucalyptus grandis
Eucgr.H00412 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2233319-2238318 Eucalyptus grandis
Eucgr.H00412 5.0kb downstream 5.0kb downstream 11192 true Chr08: 2238319-2249510 Eucalyptus grandis
Eucgr.H00412 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2244511-2249510 Eucalyptus grandis
Eucgr.H00412 10.0kb upstream 10.0kb upstream 16192 true Chr08: 2228319-2244510 Eucalyptus grandis
Eucgr.H00412 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2228319-2238318 Eucalyptus grandis
Eucgr.H00412 10.0kb downstream 10.0kb downstream 16192 true Chr08: 2238319-2254510 Eucalyptus grandis
Eucgr.H00412 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2244511-2254510 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062373 5270 Rosid View MSA
123739426 5271 Pentapetalae View MSA
122792874 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.46594 0.0 6.55609    
cufflinks 8.86704 0.0 20.7741    
cufflinks 3.58905 0.0 9.189    
cufflinks 19.7743 0.0 44.0709   High
cufflinks 25.3583 0.0 56.2131   High
cufflinks 1.70391 0.0 4.69944   Low

0 Strain