Gene : Eucgr.H00370 E. grandis v2.0
Defline:  (1 of 2) PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Genomic Order:  112
Name:  ? Eucgr.H00370 Secondary Identifier:  ? PAC:32045508
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00370 0.5kb upstream 0.5kb upstream 1950 true Chr08: 1681898-1683847 Eucalyptus grandis
Eucgr.H00370 0.5kb upstream 0.5kb upstream 500 false Chr08: 1683348-1683847 Eucalyptus grandis
Eucgr.H00370 0.5kb downstream 0.5kb downstream 1950 true Chr08: 1681398-1683347 Eucalyptus grandis
Eucgr.H00370 0.5kb downstream 0.5kb downstream 500 false Chr08: 1681398-1681897 Eucalyptus grandis
Eucgr.H00370 1.0kb upstream 1.0kb upstream 2450 true Chr08: 1681898-1684347 Eucalyptus grandis
Eucgr.H00370 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1683348-1684347 Eucalyptus grandis
Eucgr.H00370 1.0kb downstream 1.0kb downstream 2450 true Chr08: 1680898-1683347 Eucalyptus grandis
Eucgr.H00370 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1680898-1681897 Eucalyptus grandis
Eucgr.H00370 2.0kb upstream 2.0kb upstream 3450 true Chr08: 1681898-1685347 Eucalyptus grandis
Eucgr.H00370 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1683348-1685347 Eucalyptus grandis
Eucgr.H00370 2.0kb downstream 2.0kb downstream 3450 true Chr08: 1679898-1683347 Eucalyptus grandis
Eucgr.H00370 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1679898-1681897 Eucalyptus grandis
Eucgr.H00370 5.0kb upstream 5.0kb upstream 6450 true Chr08: 1681898-1688347 Eucalyptus grandis
Eucgr.H00370 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1683348-1688347 Eucalyptus grandis
Eucgr.H00370 5.0kb downstream 5.0kb downstream 6450 true Chr08: 1676898-1683347 Eucalyptus grandis
Eucgr.H00370 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1676898-1681897 Eucalyptus grandis
Eucgr.H00370 10.0kb upstream 10.0kb upstream 11450 true Chr08: 1681898-1693347 Eucalyptus grandis
Eucgr.H00370 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1683348-1693347 Eucalyptus grandis
Eucgr.H00370 10.0kb downstream 10.0kb downstream 11450 true Chr08: 1671898-1683347 Eucalyptus grandis
Eucgr.H00370 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1671898-1681897 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028011 5273 Angiosperm View MSA
124071091 5270 Rosid View MSA
123752599 5271 Pentapetalae View MSA
122791242 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.54713 0.0 18.1941    
cufflinks 231.222 0.0 561.754 High  
cufflinks 9.50066 0.0 22.4684    
cufflinks 478.573 0.0 1280.13 High High
cufflinks 201.411 0.0 483.348 High  
cufflinks 5.83952 0.0 14.3856   Low

0 Strain