Gene : Eucgr.H00248 E. grandis v2.0
Defline:  (1 of 1) PTHR22792:SF52 - LA-RELATED PROTEIN 6B Genomic Order:  12
Name:  ? Eucgr.H00248 Secondary Identifier:  ? PAC:32041570
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00248 0.5kb upstream 0.5kb upstream 4075 true Chr08: 268038-272112 Eucalyptus grandis
Eucgr.H00248 0.5kb upstream 0.5kb upstream 500 false Chr08: 268038-268537 Eucalyptus grandis
Eucgr.H00248 0.5kb downstream 0.5kb downstream 4075 true Chr08: 268538-272612 Eucalyptus grandis
Eucgr.H00248 0.5kb downstream 0.5kb downstream 500 false Chr08: 272113-272612 Eucalyptus grandis
Eucgr.H00248 1.0kb upstream 1.0kb upstream 4575 true Chr08: 267538-272112 Eucalyptus grandis
Eucgr.H00248 1.0kb upstream 1.0kb upstream 1000 false Chr08: 267538-268537 Eucalyptus grandis
Eucgr.H00248 1.0kb downstream 1.0kb downstream 4575 true Chr08: 268538-273112 Eucalyptus grandis
Eucgr.H00248 1.0kb downstream 1.0kb downstream 1000 false Chr08: 272113-273112 Eucalyptus grandis
Eucgr.H00248 2.0kb upstream 2.0kb upstream 5575 true Chr08: 266538-272112 Eucalyptus grandis
Eucgr.H00248 2.0kb upstream 2.0kb upstream 2000 false Chr08: 266538-268537 Eucalyptus grandis
Eucgr.H00248 2.0kb downstream 2.0kb downstream 5575 true Chr08: 268538-274112 Eucalyptus grandis
Eucgr.H00248 2.0kb downstream 2.0kb downstream 2000 false Chr08: 272113-274112 Eucalyptus grandis
Eucgr.H00248 5.0kb upstream 5.0kb upstream 8575 true Chr08: 263538-272112 Eucalyptus grandis
Eucgr.H00248 5.0kb upstream 5.0kb upstream 5000 false Chr08: 263538-268537 Eucalyptus grandis
Eucgr.H00248 5.0kb downstream 5.0kb downstream 8575 true Chr08: 268538-277112 Eucalyptus grandis
Eucgr.H00248 5.0kb downstream 5.0kb downstream 5000 false Chr08: 272113-277112 Eucalyptus grandis
Eucgr.H00248 10.0kb upstream 10.0kb upstream 13575 true Chr08: 258538-272112 Eucalyptus grandis
Eucgr.H00248 10.0kb upstream 10.0kb upstream 10000 false Chr08: 258538-268537 Eucalyptus grandis
Eucgr.H00248 10.0kb downstream 10.0kb downstream 13575 true Chr08: 268538-282112 Eucalyptus grandis
Eucgr.H00248 10.0kb downstream 10.0kb downstream 10000 false Chr08: 272113-282112 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073936 5270 Rosid View MSA
123744284 5271 Pentapetalae View MSA
122790327 5272 Eudicot View MSA
122051197 5273 Angiosperm View MSA
121349510 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.7015 0.0 104.906 High  
cufflinks 61.6427 0.0 148.574 High High
cufflinks 45.545 0.0 104.486 High  
cufflinks 49.2948 0.0 113.557 High  
cufflinks 34.749 0.0 78.3508   Low
cufflinks 43.9035 0.0 100.277 High  

0 Strain