Gene : Eucgr.H00244 E. grandis v2.0
Defline:  (1 of 10) PF07899 - Frigida-like protein (Frigida) Genomic Order:  8
Name:  ? Eucgr.H00244 Secondary Identifier:  ? PAC:32041403
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00244 0.5kb upstream 0.5kb upstream 5723 true Chr08: 230624-236346 Eucalyptus grandis
Eucgr.H00244 0.5kb upstream 0.5kb upstream 500 false Chr08: 230624-231123 Eucalyptus grandis
Eucgr.H00244 0.5kb downstream 0.5kb downstream 5723 true Chr08: 231124-236846 Eucalyptus grandis
Eucgr.H00244 0.5kb downstream 0.5kb downstream 500 false Chr08: 236347-236846 Eucalyptus grandis
Eucgr.H00244 1.0kb upstream 1.0kb upstream 6223 true Chr08: 230124-236346 Eucalyptus grandis
Eucgr.H00244 1.0kb upstream 1.0kb upstream 1000 false Chr08: 230124-231123 Eucalyptus grandis
Eucgr.H00244 1.0kb downstream 1.0kb downstream 6223 true Chr08: 231124-237346 Eucalyptus grandis
Eucgr.H00244 1.0kb downstream 1.0kb downstream 1000 false Chr08: 236347-237346 Eucalyptus grandis
Eucgr.H00244 2.0kb upstream 2.0kb upstream 7223 true Chr08: 229124-236346 Eucalyptus grandis
Eucgr.H00244 2.0kb upstream 2.0kb upstream 2000 false Chr08: 229124-231123 Eucalyptus grandis
Eucgr.H00244 2.0kb downstream 2.0kb downstream 7223 true Chr08: 231124-238346 Eucalyptus grandis
Eucgr.H00244 2.0kb downstream 2.0kb downstream 2000 false Chr08: 236347-238346 Eucalyptus grandis
Eucgr.H00244 5.0kb upstream 5.0kb upstream 10223 true Chr08: 226124-236346 Eucalyptus grandis
Eucgr.H00244 5.0kb upstream 5.0kb upstream 5000 false Chr08: 226124-231123 Eucalyptus grandis
Eucgr.H00244 5.0kb downstream 5.0kb downstream 10223 true Chr08: 231124-241346 Eucalyptus grandis
Eucgr.H00244 5.0kb downstream 5.0kb downstream 5000 false Chr08: 236347-241346 Eucalyptus grandis
Eucgr.H00244 10.0kb upstream 10.0kb upstream 15223 true Chr08: 221124-236346 Eucalyptus grandis
Eucgr.H00244 10.0kb upstream 10.0kb upstream 10000 false Chr08: 221124-231123 Eucalyptus grandis
Eucgr.H00244 10.0kb downstream 10.0kb downstream 15223 true Chr08: 231124-246346 Eucalyptus grandis
Eucgr.H00244 10.0kb downstream 10.0kb downstream 10000 false Chr08: 236347-246346 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068332 5270 Rosid View MSA
123746109 5271 Pentapetalae View MSA
122785719 5272 Eudicot View MSA
122043307 5273 Angiosperm View MSA
121310105 5274 Embryophyte View MSA
123347687 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.12743 0.0 20.6456   High
cufflinks 6.14908 0.0 14.2226    
cufflinks 5.99357 0.0 13.9446    
cufflinks 5.23628 0.0 12.276    
cufflinks 3.47831 0.0 8.50525   Low
cufflinks 5.63159 0.0 13.214    

0 Strain