Gene : Eucgr.H01207 E. grandis v2.0
Defline:  (1 of 1) PTHR15657:SF1 - THYROID TRANSCRIPTION FACTOR 1-ASSOCIATED PROTEIN 26 Genomic Order:  984
Name:  ? Eucgr.H01207 Secondary Identifier:  ? PAC:32042484
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01207 0.5kb upstream 0.5kb upstream 4378 true Chr08: 13932712-13937089 Eucalyptus grandis
Eucgr.H01207 0.5kb upstream 0.5kb upstream 500 false Chr08: 13932712-13933211 Eucalyptus grandis
Eucgr.H01207 0.5kb downstream 0.5kb downstream 4378 true Chr08: 13933212-13937589 Eucalyptus grandis
Eucgr.H01207 0.5kb downstream 0.5kb downstream 500 false Chr08: 13937090-13937589 Eucalyptus grandis
Eucgr.H01207 1.0kb upstream 1.0kb upstream 4878 true Chr08: 13932212-13937089 Eucalyptus grandis
Eucgr.H01207 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13932212-13933211 Eucalyptus grandis
Eucgr.H01207 1.0kb downstream 1.0kb downstream 4878 true Chr08: 13933212-13938089 Eucalyptus grandis
Eucgr.H01207 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13937090-13938089 Eucalyptus grandis
Eucgr.H01207 2.0kb upstream 2.0kb upstream 5878 true Chr08: 13931212-13937089 Eucalyptus grandis
Eucgr.H01207 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13931212-13933211 Eucalyptus grandis
Eucgr.H01207 2.0kb downstream 2.0kb downstream 5878 true Chr08: 13933212-13939089 Eucalyptus grandis
Eucgr.H01207 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13937090-13939089 Eucalyptus grandis
Eucgr.H01207 5.0kb upstream 5.0kb upstream 8878 true Chr08: 13928212-13937089 Eucalyptus grandis
Eucgr.H01207 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13928212-13933211 Eucalyptus grandis
Eucgr.H01207 5.0kb downstream 5.0kb downstream 8878 true Chr08: 13933212-13942089 Eucalyptus grandis
Eucgr.H01207 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13937090-13942089 Eucalyptus grandis
Eucgr.H01207 10.0kb upstream 10.0kb upstream 13878 true Chr08: 13923212-13937089 Eucalyptus grandis
Eucgr.H01207 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13923212-13933211 Eucalyptus grandis
Eucgr.H01207 10.0kb downstream 10.0kb downstream 13878 true Chr08: 13933212-13947089 Eucalyptus grandis
Eucgr.H01207 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13937090-13947089 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065929 5270 Rosid View MSA
123736421 5271 Pentapetalae View MSA
122791858 5272 Eudicot View MSA
122042448 5273 Angiosperm View MSA
121343985 5274 Embryophyte View MSA
123426667 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8926 0.0 25.5971    
cufflinks 12.7044 0.0 29.4879    
cufflinks 9.11838 0.0 25.1865   Low
cufflinks 8.68494 0.0 23.5306   Low
cufflinks 11.6979 0.0 31.8473    
cufflinks 12.5245 0.0 29.0524    

0 Strain