Gene : Eucgr.H01184 E. grandis v2.0
Defline:  (1 of 4) PTHR11652//PTHR11652:SF17 - 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER Genomic Order:  962
Name:  ? Eucgr.H01184 Secondary Identifier:  ? PAC:32044858
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01184 0.5kb upstream 0.5kb upstream 779 true Chr08: 13571696-13572474 Eucalyptus grandis
Eucgr.H01184 0.5kb upstream 0.5kb upstream 500 false Chr08: 13571975-13572474 Eucalyptus grandis
Eucgr.H01184 0.5kb downstream 0.5kb downstream 779 true Chr08: 13571196-13571974 Eucalyptus grandis
Eucgr.H01184 0.5kb downstream 0.5kb downstream 500 false Chr08: 13571196-13571695 Eucalyptus grandis
Eucgr.H01184 1.0kb upstream 1.0kb upstream 1279 true Chr08: 13571696-13572974 Eucalyptus grandis
Eucgr.H01184 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13571975-13572974 Eucalyptus grandis
Eucgr.H01184 1.0kb downstream 1.0kb downstream 1279 true Chr08: 13570696-13571974 Eucalyptus grandis
Eucgr.H01184 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13570696-13571695 Eucalyptus grandis
Eucgr.H01184 2.0kb upstream 2.0kb upstream 2279 true Chr08: 13571696-13573974 Eucalyptus grandis
Eucgr.H01184 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13571975-13573974 Eucalyptus grandis
Eucgr.H01184 2.0kb downstream 2.0kb downstream 2279 true Chr08: 13569696-13571974 Eucalyptus grandis
Eucgr.H01184 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13569696-13571695 Eucalyptus grandis
Eucgr.H01184 5.0kb upstream 5.0kb upstream 5279 true Chr08: 13571696-13576974 Eucalyptus grandis
Eucgr.H01184 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13571975-13576974 Eucalyptus grandis
Eucgr.H01184 5.0kb downstream 5.0kb downstream 5279 true Chr08: 13566696-13571974 Eucalyptus grandis
Eucgr.H01184 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13566696-13571695 Eucalyptus grandis
Eucgr.H01184 10.0kb upstream 10.0kb upstream 10279 true Chr08: 13571696-13581974 Eucalyptus grandis
Eucgr.H01184 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13571975-13581974 Eucalyptus grandis
Eucgr.H01184 10.0kb downstream 10.0kb downstream 10279 true Chr08: 13561696-13571974 Eucalyptus grandis
Eucgr.H01184 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13561696-13571695 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063732 5270 Rosid View MSA
123750891 5271 Pentapetalae View MSA
122796702 5272 Eudicot View MSA
122044358 5273 Angiosperm View MSA
123429171 5275 Viridiplantae View MSA
121351184 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.1141 0.0 56.0589    
cufflinks 18.7627 0.0 54.0831    
cufflinks 30.9347 0.0 87.139 High High
cufflinks 25.7581 0.0 73.8825    
cufflinks 11.9419 0.0 36.7835   Low
cufflinks 23.6438 0.0 69.7765    

0 Strain