Gene : Eucgr.H01152 E. grandis v2.0
Defline:  (1 of 2) PTHR23041:SF64 - E3 UBIQUITIN-PROTEIN LIGASE BAH1 Genomic Order:  933
Name:  ? Eucgr.H01152 Secondary Identifier:  ? PAC:32043006
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01152 0.5kb upstream 0.5kb upstream 4357 true Chr08: 13332948-13337304 Eucalyptus grandis
Eucgr.H01152 0.5kb upstream 0.5kb upstream 500 false Chr08: 13332948-13333447 Eucalyptus grandis
Eucgr.H01152 0.5kb downstream 0.5kb downstream 4357 true Chr08: 13333448-13337804 Eucalyptus grandis
Eucgr.H01152 0.5kb downstream 0.5kb downstream 500 false Chr08: 13337305-13337804 Eucalyptus grandis
Eucgr.H01152 1.0kb upstream 1.0kb upstream 4857 true Chr08: 13332448-13337304 Eucalyptus grandis
Eucgr.H01152 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13332448-13333447 Eucalyptus grandis
Eucgr.H01152 1.0kb downstream 1.0kb downstream 4857 true Chr08: 13333448-13338304 Eucalyptus grandis
Eucgr.H01152 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13337305-13338304 Eucalyptus grandis
Eucgr.H01152 2.0kb upstream 2.0kb upstream 5857 true Chr08: 13331448-13337304 Eucalyptus grandis
Eucgr.H01152 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13331448-13333447 Eucalyptus grandis
Eucgr.H01152 2.0kb downstream 2.0kb downstream 5857 true Chr08: 13333448-13339304 Eucalyptus grandis
Eucgr.H01152 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13337305-13339304 Eucalyptus grandis
Eucgr.H01152 5.0kb upstream 5.0kb upstream 8857 true Chr08: 13328448-13337304 Eucalyptus grandis
Eucgr.H01152 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13328448-13333447 Eucalyptus grandis
Eucgr.H01152 5.0kb downstream 5.0kb downstream 8857 true Chr08: 13333448-13342304 Eucalyptus grandis
Eucgr.H01152 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13337305-13342304 Eucalyptus grandis
Eucgr.H01152 10.0kb upstream 10.0kb upstream 13857 true Chr08: 13323448-13337304 Eucalyptus grandis
Eucgr.H01152 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13323448-13333447 Eucalyptus grandis
Eucgr.H01152 10.0kb downstream 10.0kb downstream 13857 true Chr08: 13333448-13347304 Eucalyptus grandis
Eucgr.H01152 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13337305-13347304 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062442 5270 Rosid View MSA
123751334 5271 Pentapetalae View MSA
122791887 5272 Eudicot View MSA
122042186 5273 Angiosperm View MSA
121350146 5274 Embryophyte View MSA
123425854 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.92829 0.0 5.2705    
cufflinks 25.9339 0.0 57.4974   High
cufflinks 2.18004 0.0 5.88573    
cufflinks 22.8952 0.0 50.8971   High
cufflinks 3.12608 0.0 8.15504    
cufflinks 1.42109 0.0 4.02133    

0 Strain