Gene : Eucgr.H01156 E. grandis v2.0
Defline:  (1 of 2) 2.7.6.2 - Thiamine diphosphokinase / Thiamine pyrophosphokinase Genomic Order:  936
Name:  ? Eucgr.H01156 Secondary Identifier:  ? PAC:32041605
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6908 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01156 0.5kb upstream 0.5kb upstream 6169 true Chr08: 13348345-13354513 Eucalyptus grandis
Eucgr.H01156 0.5kb upstream 0.5kb upstream 500 false Chr08: 13354014-13354513 Eucalyptus grandis
Eucgr.H01156 0.5kb downstream 0.5kb downstream 6169 true Chr08: 13347845-13354013 Eucalyptus grandis
Eucgr.H01156 0.5kb downstream 0.5kb downstream 500 false Chr08: 13347845-13348344 Eucalyptus grandis
Eucgr.H01156 1.0kb upstream 1.0kb upstream 6669 true Chr08: 13348345-13355013 Eucalyptus grandis
Eucgr.H01156 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13354014-13355013 Eucalyptus grandis
Eucgr.H01156 1.0kb downstream 1.0kb downstream 6669 true Chr08: 13347345-13354013 Eucalyptus grandis
Eucgr.H01156 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13347345-13348344 Eucalyptus grandis
Eucgr.H01156 2.0kb upstream 2.0kb upstream 7669 true Chr08: 13348345-13356013 Eucalyptus grandis
Eucgr.H01156 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13354014-13356013 Eucalyptus grandis
Eucgr.H01156 2.0kb downstream 2.0kb downstream 7669 true Chr08: 13346345-13354013 Eucalyptus grandis
Eucgr.H01156 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13346345-13348344 Eucalyptus grandis
Eucgr.H01156 5.0kb upstream 5.0kb upstream 10669 true Chr08: 13348345-13359013 Eucalyptus grandis
Eucgr.H01156 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13354014-13359013 Eucalyptus grandis
Eucgr.H01156 5.0kb downstream 5.0kb downstream 10669 true Chr08: 13343345-13354013 Eucalyptus grandis
Eucgr.H01156 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13343345-13348344 Eucalyptus grandis
Eucgr.H01156 10.0kb upstream 10.0kb upstream 15669 true Chr08: 13348345-13364013 Eucalyptus grandis
Eucgr.H01156 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13354014-13364013 Eucalyptus grandis
Eucgr.H01156 10.0kb downstream 10.0kb downstream 15669 true Chr08: 13338345-13354013 Eucalyptus grandis
Eucgr.H01156 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13338345-13348344 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064421 5270 Rosid View MSA
123740086 5271 Pentapetalae View MSA
122769969 5272 Eudicot View MSA
122046316 5273 Angiosperm View MSA
121345006 5274 Embryophyte View MSA
123424730 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.8208 0.0 34.7594    
cufflinks 12.1437 0.0 28.9352    
cufflinks 13.5945 0.0 32.1755    
cufflinks 11.2875 0.0 27.1974    
cufflinks 7.12602 0.0 17.9747   Low
cufflinks 14.5485 0.0 34.1367    

0 Strain