Gene : Eucgr.H01083 E. grandis v2.0
Defline:  (1 of 2) 4.2.1.2 - Fumarate hydratase / Fumarase Genomic Order:  872
Name:  ? Eucgr.H01083 Secondary Identifier:  ? PAC:32041322
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PWY-561 Eucalyptus grandis pathologic  
Egrandis PWY-5690 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01083 0.5kb upstream 0.5kb upstream 7596 true Chr08: 12551221-12558816 Eucalyptus grandis
Eucgr.H01083 0.5kb upstream 0.5kb upstream 500 false Chr08: 12551221-12551720 Eucalyptus grandis
Eucgr.H01083 0.5kb downstream 0.5kb downstream 7596 true Chr08: 12551721-12559316 Eucalyptus grandis
Eucgr.H01083 0.5kb downstream 0.5kb downstream 500 false Chr08: 12558817-12559316 Eucalyptus grandis
Eucgr.H01083 1.0kb upstream 1.0kb upstream 8096 true Chr08: 12550721-12558816 Eucalyptus grandis
Eucgr.H01083 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12550721-12551720 Eucalyptus grandis
Eucgr.H01083 1.0kb downstream 1.0kb downstream 8096 true Chr08: 12551721-12559816 Eucalyptus grandis
Eucgr.H01083 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12558817-12559816 Eucalyptus grandis
Eucgr.H01083 2.0kb upstream 2.0kb upstream 9096 true Chr08: 12549721-12558816 Eucalyptus grandis
Eucgr.H01083 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12549721-12551720 Eucalyptus grandis
Eucgr.H01083 2.0kb downstream 2.0kb downstream 9096 true Chr08: 12551721-12560816 Eucalyptus grandis
Eucgr.H01083 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12558817-12560816 Eucalyptus grandis
Eucgr.H01083 5.0kb upstream 5.0kb upstream 12096 true Chr08: 12546721-12558816 Eucalyptus grandis
Eucgr.H01083 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12546721-12551720 Eucalyptus grandis
Eucgr.H01083 5.0kb downstream 5.0kb downstream 12096 true Chr08: 12551721-12563816 Eucalyptus grandis
Eucgr.H01083 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12558817-12563816 Eucalyptus grandis
Eucgr.H01083 10.0kb upstream 10.0kb upstream 17096 true Chr08: 12541721-12558816 Eucalyptus grandis
Eucgr.H01083 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12541721-12551720 Eucalyptus grandis
Eucgr.H01083 10.0kb downstream 10.0kb downstream 17096 true Chr08: 12551721-12568816 Eucalyptus grandis
Eucgr.H01083 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12558817-12568816 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124075126 5270 Rosid View MSA
123628758 5271 Pentapetalae View MSA
122798493 5272 Eudicot View MSA
122047120 5273 Angiosperm View MSA
121349544 5274 Embryophyte View MSA
123423814 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0112357 0.0 0.11313 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.69568 0.0 2.12025    
cufflinks 1.49349 0.0 4.16594    
cufflinks 1.32624 0.0 3.76011    
cufflinks 0.0645555 0.0 0.31377 Low  

0 Strain