Gene : Eucgr.H00999 E. grandis v2.0
Defline:  (1 of 1) PTHR23303 - CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING Genomic Order:  798
Name:  ? Eucgr.H00999 Secondary Identifier:  ? PAC:32041147
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00999 0.5kb upstream 0.5kb upstream 16741 true Chr08: 11671201-11687941 Eucalyptus grandis
Eucgr.H00999 0.5kb upstream 0.5kb upstream 500 false Chr08: 11687442-11687941 Eucalyptus grandis
Eucgr.H00999 0.5kb downstream 0.5kb downstream 16741 true Chr08: 11670701-11687441 Eucalyptus grandis
Eucgr.H00999 0.5kb downstream 0.5kb downstream 500 false Chr08: 11670701-11671200 Eucalyptus grandis
Eucgr.H00999 1.0kb upstream 1.0kb upstream 17241 true Chr08: 11671201-11688441 Eucalyptus grandis
Eucgr.H00999 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11687442-11688441 Eucalyptus grandis
Eucgr.H00999 1.0kb downstream 1.0kb downstream 17241 true Chr08: 11670201-11687441 Eucalyptus grandis
Eucgr.H00999 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11670201-11671200 Eucalyptus grandis
Eucgr.H00999 2.0kb upstream 2.0kb upstream 18241 true Chr08: 11671201-11689441 Eucalyptus grandis
Eucgr.H00999 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11687442-11689441 Eucalyptus grandis
Eucgr.H00999 2.0kb downstream 2.0kb downstream 18241 true Chr08: 11669201-11687441 Eucalyptus grandis
Eucgr.H00999 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11669201-11671200 Eucalyptus grandis
Eucgr.H00999 5.0kb upstream 5.0kb upstream 21241 true Chr08: 11671201-11692441 Eucalyptus grandis
Eucgr.H00999 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11687442-11692441 Eucalyptus grandis
Eucgr.H00999 5.0kb downstream 5.0kb downstream 21241 true Chr08: 11666201-11687441 Eucalyptus grandis
Eucgr.H00999 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11666201-11671200 Eucalyptus grandis
Eucgr.H00999 10.0kb upstream 10.0kb upstream 26241 true Chr08: 11671201-11697441 Eucalyptus grandis
Eucgr.H00999 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11687442-11697441 Eucalyptus grandis
Eucgr.H00999 10.0kb downstream 10.0kb downstream 26241 true Chr08: 11661201-11687441 Eucalyptus grandis
Eucgr.H00999 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11661201-11671200 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064974 5270 Rosid View MSA
123737626 5271 Pentapetalae View MSA
122788154 5272 Eudicot View MSA
122048074 5273 Angiosperm View MSA
121346415 5274 Embryophyte View MSA
123380379 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5413 0.0 34.4235    
cufflinks 12.7488 0.0 28.201   Low
cufflinks 13.8176 0.0 30.5785    
cufflinks 17.5317 0.0 38.9879    
cufflinks 14.5896 0.0 32.3043    
cufflinks 22.2046 0.0 49.5293   High

0 Strain