Gene : Eucgr.H01000 E. grandis v2.0
Defline:  (1 of 2) PTHR36044:SF1 - HEME BINDING PROTEIN Genomic Order:  799
Name:  ? Eucgr.H01000 Secondary Identifier:  ? PAC:32044549
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01000 0.5kb upstream 0.5kb upstream 5420 true Chr08: 11694593-11700012 Eucalyptus grandis
Eucgr.H01000 0.5kb upstream 0.5kb upstream 500 false Chr08: 11694593-11695092 Eucalyptus grandis
Eucgr.H01000 0.5kb downstream 0.5kb downstream 5420 true Chr08: 11695093-11700512 Eucalyptus grandis
Eucgr.H01000 0.5kb downstream 0.5kb downstream 500 false Chr08: 11700013-11700512 Eucalyptus grandis
Eucgr.H01000 1.0kb upstream 1.0kb upstream 5920 true Chr08: 11694093-11700012 Eucalyptus grandis
Eucgr.H01000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11694093-11695092 Eucalyptus grandis
Eucgr.H01000 1.0kb downstream 1.0kb downstream 5920 true Chr08: 11695093-11701012 Eucalyptus grandis
Eucgr.H01000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11700013-11701012 Eucalyptus grandis
Eucgr.H01000 2.0kb upstream 2.0kb upstream 6920 true Chr08: 11693093-11700012 Eucalyptus grandis
Eucgr.H01000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11693093-11695092 Eucalyptus grandis
Eucgr.H01000 2.0kb downstream 2.0kb downstream 6920 true Chr08: 11695093-11702012 Eucalyptus grandis
Eucgr.H01000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11700013-11702012 Eucalyptus grandis
Eucgr.H01000 5.0kb upstream 5.0kb upstream 9920 true Chr08: 11690093-11700012 Eucalyptus grandis
Eucgr.H01000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11690093-11695092 Eucalyptus grandis
Eucgr.H01000 5.0kb downstream 5.0kb downstream 9920 true Chr08: 11695093-11705012 Eucalyptus grandis
Eucgr.H01000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11700013-11705012 Eucalyptus grandis
Eucgr.H01000 10.0kb upstream 10.0kb upstream 14920 true Chr08: 11685093-11700012 Eucalyptus grandis
Eucgr.H01000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11685093-11695092 Eucalyptus grandis
Eucgr.H01000 10.0kb downstream 10.0kb downstream 14920 true Chr08: 11695093-11710012 Eucalyptus grandis
Eucgr.H01000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11700013-11710012 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041410 5273 Angiosperm View MSA
124052430 5270 Rosid View MSA
123745290 5271 Pentapetalae View MSA
122793482 5272 Eudicot View MSA
121347553 5274 Embryophyte View MSA
123380570 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.97063 0.0 12.51    
cufflinks 1.53394 0.0 4.34434   Low
cufflinks 4.271 0.0 10.9278    
cufflinks 2.98402 0.0 7.90269    
cufflinks 2.46855 0.0 6.66657    
cufflinks 6.03923 0.0 14.8776   High

0 Strain