Gene : Eucgr.H00872 E. grandis v2.0
Defline:  (1 of 5) PTHR13994:SF10 - MUTT/NUDIX-LIKE PROTEIN-RELATED Genomic Order:  763
Name:  ? Eucgr.H00872 Secondary Identifier:  ? PAC:32044812
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5381 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00872 0.5kb upstream 0.5kb upstream 3695 true Chr08: 11164868-11168562 Eucalyptus grandis
Eucgr.H00872 0.5kb upstream 0.5kb upstream 500 false Chr08: 11164868-11165367 Eucalyptus grandis
Eucgr.H00872 0.5kb downstream 0.5kb downstream 3695 true Chr08: 11165368-11169062 Eucalyptus grandis
Eucgr.H00872 0.5kb downstream 0.5kb downstream 500 false Chr08: 11168563-11169062 Eucalyptus grandis
Eucgr.H00872 1.0kb upstream 1.0kb upstream 4195 true Chr08: 11164368-11168562 Eucalyptus grandis
Eucgr.H00872 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11164368-11165367 Eucalyptus grandis
Eucgr.H00872 1.0kb downstream 1.0kb downstream 4195 true Chr08: 11165368-11169562 Eucalyptus grandis
Eucgr.H00872 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11168563-11169562 Eucalyptus grandis
Eucgr.H00872 2.0kb upstream 2.0kb upstream 5195 true Chr08: 11163368-11168562 Eucalyptus grandis
Eucgr.H00872 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11163368-11165367 Eucalyptus grandis
Eucgr.H00872 2.0kb downstream 2.0kb downstream 5195 true Chr08: 11165368-11170562 Eucalyptus grandis
Eucgr.H00872 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11168563-11170562 Eucalyptus grandis
Eucgr.H00872 5.0kb upstream 5.0kb upstream 8195 true Chr08: 11160368-11168562 Eucalyptus grandis
Eucgr.H00872 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11160368-11165367 Eucalyptus grandis
Eucgr.H00872 5.0kb downstream 5.0kb downstream 8195 true Chr08: 11165368-11173562 Eucalyptus grandis
Eucgr.H00872 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11168563-11173562 Eucalyptus grandis
Eucgr.H00872 10.0kb upstream 10.0kb upstream 13195 true Chr08: 11155368-11168562 Eucalyptus grandis
Eucgr.H00872 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11155368-11165367 Eucalyptus grandis
Eucgr.H00872 10.0kb downstream 10.0kb downstream 13195 true Chr08: 11165368-11178562 Eucalyptus grandis
Eucgr.H00872 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11168563-11178562 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051820 5270 Rosid View MSA
123746480 5271 Pentapetalae View MSA
122788941 5272 Eudicot View MSA
122049902 5273 Angiosperm View MSA
121347954 5274 Embryophyte View MSA
123428722 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.29594 0.0 1.05342 Low Low
cufflinks 0.269358 0.0 0.966353 Low Low
cufflinks 1.6987 0.0 4.85463    
cufflinks 2.41115 0.0 6.61794    
cufflinks 2.10387 0.0 5.86464    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain