Gene : Eucgr.H00868 E. grandis v2.0
Defline:  (1 of 5) PTHR13994:SF10 - MUTT/NUDIX-LIKE PROTEIN-RELATED Genomic Order:  760
Name:  ? Eucgr.H00868 Secondary Identifier:  ? PAC:32041169
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5381 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00868 0.5kb upstream 0.5kb upstream 3510 true Chr08: 11140257-11143766 Eucalyptus grandis
Eucgr.H00868 0.5kb upstream 0.5kb upstream 500 false Chr08: 11140257-11140756 Eucalyptus grandis
Eucgr.H00868 0.5kb downstream 0.5kb downstream 3510 true Chr08: 11140757-11144266 Eucalyptus grandis
Eucgr.H00868 0.5kb downstream 0.5kb downstream 500 false Chr08: 11143767-11144266 Eucalyptus grandis
Eucgr.H00868 1.0kb upstream 1.0kb upstream 4010 true Chr08: 11139757-11143766 Eucalyptus grandis
Eucgr.H00868 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11139757-11140756 Eucalyptus grandis
Eucgr.H00868 1.0kb downstream 1.0kb downstream 4010 true Chr08: 11140757-11144766 Eucalyptus grandis
Eucgr.H00868 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11143767-11144766 Eucalyptus grandis
Eucgr.H00868 2.0kb upstream 2.0kb upstream 5010 true Chr08: 11138757-11143766 Eucalyptus grandis
Eucgr.H00868 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11138757-11140756 Eucalyptus grandis
Eucgr.H00868 2.0kb downstream 2.0kb downstream 5010 true Chr08: 11140757-11145766 Eucalyptus grandis
Eucgr.H00868 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11143767-11145766 Eucalyptus grandis
Eucgr.H00868 5.0kb upstream 5.0kb upstream 8010 true Chr08: 11135757-11143766 Eucalyptus grandis
Eucgr.H00868 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11135757-11140756 Eucalyptus grandis
Eucgr.H00868 5.0kb downstream 5.0kb downstream 8010 true Chr08: 11140757-11148766 Eucalyptus grandis
Eucgr.H00868 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11143767-11148766 Eucalyptus grandis
Eucgr.H00868 10.0kb upstream 10.0kb upstream 13010 true Chr08: 11130757-11143766 Eucalyptus grandis
Eucgr.H00868 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11130757-11140756 Eucalyptus grandis
Eucgr.H00868 10.0kb downstream 10.0kb downstream 13010 true Chr08: 11140757-11153766 Eucalyptus grandis
Eucgr.H00868 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11143767-11153766 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051820 5270 Rosid View MSA
123746480 5271 Pentapetalae View MSA
122788941 5272 Eudicot View MSA
122049902 5273 Angiosperm View MSA
121347954 5274 Embryophyte View MSA
123428722 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0367978 0.0 0.281245 Low Low
cufflinks 0.421839 0.0 1.46979 Low  
cufflinks 1.33033 0.0 4.02014    
cufflinks 0.408919 0.0 1.43015 Low  
cufflinks 4.53065 0.0 12.0012   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain