Gene : Eucgr.H00830 E. grandis v2.0
Defline:  (1 of 1) PTHR10168:SF14 - GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED Genomic Order:  730
Name:  ? Eucgr.H00830 Secondary Identifier:  ? PAC:32044820
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis THIOREDOX-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00830 0.5kb upstream 0.5kb upstream 3612 true Chr08: 10647916-10651527 Eucalyptus grandis
Eucgr.H00830 0.5kb upstream 0.5kb upstream 500 false Chr08: 10651028-10651527 Eucalyptus grandis
Eucgr.H00830 0.5kb downstream 0.5kb downstream 3612 true Chr08: 10647416-10651027 Eucalyptus grandis
Eucgr.H00830 0.5kb downstream 0.5kb downstream 500 false Chr08: 10647416-10647915 Eucalyptus grandis
Eucgr.H00830 1.0kb upstream 1.0kb upstream 4112 true Chr08: 10647916-10652027 Eucalyptus grandis
Eucgr.H00830 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10651028-10652027 Eucalyptus grandis
Eucgr.H00830 1.0kb downstream 1.0kb downstream 4112 true Chr08: 10646916-10651027 Eucalyptus grandis
Eucgr.H00830 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10646916-10647915 Eucalyptus grandis
Eucgr.H00830 2.0kb upstream 2.0kb upstream 5112 true Chr08: 10647916-10653027 Eucalyptus grandis
Eucgr.H00830 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10651028-10653027 Eucalyptus grandis
Eucgr.H00830 2.0kb downstream 2.0kb downstream 5112 true Chr08: 10645916-10651027 Eucalyptus grandis
Eucgr.H00830 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10645916-10647915 Eucalyptus grandis
Eucgr.H00830 5.0kb upstream 5.0kb upstream 8112 true Chr08: 10647916-10656027 Eucalyptus grandis
Eucgr.H00830 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10651028-10656027 Eucalyptus grandis
Eucgr.H00830 5.0kb downstream 5.0kb downstream 8112 true Chr08: 10642916-10651027 Eucalyptus grandis
Eucgr.H00830 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10642916-10647915 Eucalyptus grandis
Eucgr.H00830 10.0kb upstream 10.0kb upstream 13112 true Chr08: 10647916-10661027 Eucalyptus grandis
Eucgr.H00830 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10651028-10661027 Eucalyptus grandis
Eucgr.H00830 10.0kb downstream 10.0kb downstream 13112 true Chr08: 10637916-10651027 Eucalyptus grandis
Eucgr.H00830 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10637916-10647915 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026565 5273 Angiosperm View MSA
124066843 5270 Rosid View MSA
123737863 5271 Pentapetalae View MSA
122787960 5272 Eudicot View MSA
121350843 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.1037 0.0 46.0376   High
cufflinks 12.9817 0.0 30.932    
cufflinks 13.5898 0.0 32.1901    
cufflinks 16.8142 0.0 39.045    
cufflinks 8.94133 0.0 21.9829   Low
cufflinks 12.1529 0.0 28.7838    

0 Strain