Gene : Eucgr.H00805 E. grandis v2.0
Defline:  (1 of 2) PTHR13516:SF3 - ALBA DNA/RNA-BINDING PROTEIN Genomic Order:  707
Name:  ? Eucgr.H00805 Secondary Identifier:  ? PAC:32042524
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00805 0.5kb upstream 0.5kb upstream 3973 true Chr08: 10444873-10448845 Eucalyptus grandis
Eucgr.H00805 0.5kb upstream 0.5kb upstream 500 false Chr08: 10448346-10448845 Eucalyptus grandis
Eucgr.H00805 0.5kb downstream 0.5kb downstream 3973 true Chr08: 10444373-10448345 Eucalyptus grandis
Eucgr.H00805 0.5kb downstream 0.5kb downstream 500 false Chr08: 10444373-10444872 Eucalyptus grandis
Eucgr.H00805 1.0kb upstream 1.0kb upstream 4473 true Chr08: 10444873-10449345 Eucalyptus grandis
Eucgr.H00805 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10448346-10449345 Eucalyptus grandis
Eucgr.H00805 1.0kb downstream 1.0kb downstream 4473 true Chr08: 10443873-10448345 Eucalyptus grandis
Eucgr.H00805 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10443873-10444872 Eucalyptus grandis
Eucgr.H00805 2.0kb upstream 2.0kb upstream 5473 true Chr08: 10444873-10450345 Eucalyptus grandis
Eucgr.H00805 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10448346-10450345 Eucalyptus grandis
Eucgr.H00805 2.0kb downstream 2.0kb downstream 5473 true Chr08: 10442873-10448345 Eucalyptus grandis
Eucgr.H00805 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10442873-10444872 Eucalyptus grandis
Eucgr.H00805 5.0kb upstream 5.0kb upstream 8473 true Chr08: 10444873-10453345 Eucalyptus grandis
Eucgr.H00805 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10448346-10453345 Eucalyptus grandis
Eucgr.H00805 5.0kb downstream 5.0kb downstream 8473 true Chr08: 10439873-10448345 Eucalyptus grandis
Eucgr.H00805 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10439873-10444872 Eucalyptus grandis
Eucgr.H00805 10.0kb upstream 10.0kb upstream 13473 true Chr08: 10444873-10458345 Eucalyptus grandis
Eucgr.H00805 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10448346-10458345 Eucalyptus grandis
Eucgr.H00805 10.0kb downstream 10.0kb downstream 13473 true Chr08: 10434873-10448345 Eucalyptus grandis
Eucgr.H00805 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10434873-10444872 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070667 5270 Rosid View MSA
123752020 5271 Pentapetalae View MSA
122793375 5272 Eudicot View MSA
122050157 5273 Angiosperm View MSA
121346602 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.62072 0.0 22.5637    
cufflinks 13.5344 0.0 30.9523   High
cufflinks 11.5849 0.0 26.7359    
cufflinks 6.94404 0.0 16.6991    
cufflinks 4.65032 0.0 11.73   Low
cufflinks 5.13229 0.0 12.7558    

0 Strain