Gene : Eucgr.H00824 E. grandis v2.0
Defline:  (1 of 1) PTHR24106:SF146 - RNI-LIKE SUPERFAMILY PROTEIN Genomic Order:  724
Name:  ? Eucgr.H00824 Secondary Identifier:  ? PAC:32042221
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00824 0.5kb upstream 0.5kb upstream 8250 true Chr08: 10597425-10605674 Eucalyptus grandis
Eucgr.H00824 0.5kb upstream 0.5kb upstream 500 false Chr08: 10605175-10605674 Eucalyptus grandis
Eucgr.H00824 0.5kb downstream 0.5kb downstream 8250 true Chr08: 10596925-10605174 Eucalyptus grandis
Eucgr.H00824 0.5kb downstream 0.5kb downstream 500 false Chr08: 10596925-10597424 Eucalyptus grandis
Eucgr.H00824 1.0kb upstream 1.0kb upstream 8750 true Chr08: 10597425-10606174 Eucalyptus grandis
Eucgr.H00824 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10605175-10606174 Eucalyptus grandis
Eucgr.H00824 1.0kb downstream 1.0kb downstream 8750 true Chr08: 10596425-10605174 Eucalyptus grandis
Eucgr.H00824 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10596425-10597424 Eucalyptus grandis
Eucgr.H00824 2.0kb upstream 2.0kb upstream 9750 true Chr08: 10597425-10607174 Eucalyptus grandis
Eucgr.H00824 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10605175-10607174 Eucalyptus grandis
Eucgr.H00824 2.0kb downstream 2.0kb downstream 9750 true Chr08: 10595425-10605174 Eucalyptus grandis
Eucgr.H00824 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10595425-10597424 Eucalyptus grandis
Eucgr.H00824 5.0kb upstream 5.0kb upstream 12750 true Chr08: 10597425-10610174 Eucalyptus grandis
Eucgr.H00824 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10605175-10610174 Eucalyptus grandis
Eucgr.H00824 5.0kb downstream 5.0kb downstream 12750 true Chr08: 10592425-10605174 Eucalyptus grandis
Eucgr.H00824 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10592425-10597424 Eucalyptus grandis
Eucgr.H00824 10.0kb upstream 10.0kb upstream 17750 true Chr08: 10597425-10615174 Eucalyptus grandis
Eucgr.H00824 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10605175-10615174 Eucalyptus grandis
Eucgr.H00824 10.0kb downstream 10.0kb downstream 17750 true Chr08: 10587425-10605174 Eucalyptus grandis
Eucgr.H00824 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10587425-10597424 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050272 5270 Rosid View MSA
123739993 5271 Pentapetalae View MSA
122792810 5272 Eudicot View MSA
122043021 5273 Angiosperm View MSA
121348154 5274 Embryophyte View MSA
123380748 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.37764 0.0 8.39269    
cufflinks 0.840394 0.0 2.38011 Low Low
cufflinks 3.16631 0.0 7.89472    
cufflinks 1.56203 0.0 4.15855    
cufflinks 1.39772 0.0 3.77467    
cufflinks 5.47732 0.0 13.0413   High

0 Strain