Gene : Eucgr.H00746 E. grandis v2.0
Defline:  (1 of 1) PTHR23089:SF7 - HIT FAMILY PROTEIN 1 Genomic Order:  660
Name:  ? Eucgr.H00746 Secondary Identifier:  ? PAC:32041682
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00746 0.5kb upstream 0.5kb upstream 4876 true Chr08: 9906791-9911666 Eucalyptus grandis
Eucgr.H00746 0.5kb upstream 0.5kb upstream 500 false Chr08: 9906791-9907290 Eucalyptus grandis
Eucgr.H00746 0.5kb downstream 0.5kb downstream 4876 true Chr08: 9907291-9912166 Eucalyptus grandis
Eucgr.H00746 0.5kb downstream 0.5kb downstream 500 false Chr08: 9911667-9912166 Eucalyptus grandis
Eucgr.H00746 1.0kb upstream 1.0kb upstream 5376 true Chr08: 9906291-9911666 Eucalyptus grandis
Eucgr.H00746 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9906291-9907290 Eucalyptus grandis
Eucgr.H00746 1.0kb downstream 1.0kb downstream 5376 true Chr08: 9907291-9912666 Eucalyptus grandis
Eucgr.H00746 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9911667-9912666 Eucalyptus grandis
Eucgr.H00746 2.0kb upstream 2.0kb upstream 6376 true Chr08: 9905291-9911666 Eucalyptus grandis
Eucgr.H00746 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9905291-9907290 Eucalyptus grandis
Eucgr.H00746 2.0kb downstream 2.0kb downstream 6376 true Chr08: 9907291-9913666 Eucalyptus grandis
Eucgr.H00746 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9911667-9913666 Eucalyptus grandis
Eucgr.H00746 5.0kb upstream 5.0kb upstream 9376 true Chr08: 9902291-9911666 Eucalyptus grandis
Eucgr.H00746 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9902291-9907290 Eucalyptus grandis
Eucgr.H00746 5.0kb downstream 5.0kb downstream 9376 true Chr08: 9907291-9916666 Eucalyptus grandis
Eucgr.H00746 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9911667-9916666 Eucalyptus grandis
Eucgr.H00746 10.0kb upstream 10.0kb upstream 14376 true Chr08: 9897291-9911666 Eucalyptus grandis
Eucgr.H00746 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9897291-9907290 Eucalyptus grandis
Eucgr.H00746 10.0kb downstream 10.0kb downstream 14376 true Chr08: 9907291-9921666 Eucalyptus grandis
Eucgr.H00746 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9911667-9921666 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050328 5270 Rosid View MSA
123747723 5271 Pentapetalae View MSA
122788071 5272 Eudicot View MSA
122049116 5273 Angiosperm View MSA
121311254 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.69942 0.0 15.1557    
cufflinks 11.6632 0.0 36.0587   High
cufflinks 3.86032 0.0 10.9697   Low
cufflinks 8.5305 0.0 21.2666    
cufflinks 10.9868 0.0 32.1418   High
cufflinks 5.18346 0.0 13.9897    

0 Strain