Gene : Eucgr.H00759 E. grandis v2.0
Defline:  (1 of 1) KOG0794 - CDK8 kinase-activating protein cyclin C Genomic Order:  673
Name:  ? Eucgr.H00759 Secondary Identifier:  ? PAC:32045277
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00759 0.5kb upstream 0.5kb upstream 14415 true Chr08: 10004490-10018904 Eucalyptus grandis
Eucgr.H00759 0.5kb upstream 0.5kb upstream 500 false Chr08: 10018405-10018904 Eucalyptus grandis
Eucgr.H00759 0.5kb downstream 0.5kb downstream 14415 true Chr08: 10003990-10018404 Eucalyptus grandis
Eucgr.H00759 0.5kb downstream 0.5kb downstream 500 false Chr08: 10003990-10004489 Eucalyptus grandis
Eucgr.H00759 1.0kb upstream 1.0kb upstream 14915 true Chr08: 10004490-10019404 Eucalyptus grandis
Eucgr.H00759 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10018405-10019404 Eucalyptus grandis
Eucgr.H00759 1.0kb downstream 1.0kb downstream 14915 true Chr08: 10003490-10018404 Eucalyptus grandis
Eucgr.H00759 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10003490-10004489 Eucalyptus grandis
Eucgr.H00759 2.0kb upstream 2.0kb upstream 15915 true Chr08: 10004490-10020404 Eucalyptus grandis
Eucgr.H00759 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10018405-10020404 Eucalyptus grandis
Eucgr.H00759 2.0kb downstream 2.0kb downstream 15915 true Chr08: 10002490-10018404 Eucalyptus grandis
Eucgr.H00759 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10002490-10004489 Eucalyptus grandis
Eucgr.H00759 5.0kb upstream 5.0kb upstream 18915 true Chr08: 10004490-10023404 Eucalyptus grandis
Eucgr.H00759 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10018405-10023404 Eucalyptus grandis
Eucgr.H00759 5.0kb downstream 5.0kb downstream 18915 true Chr08: 9999490-10018404 Eucalyptus grandis
Eucgr.H00759 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9999490-10004489 Eucalyptus grandis
Eucgr.H00759 10.0kb upstream 10.0kb upstream 23915 true Chr08: 10004490-10028404 Eucalyptus grandis
Eucgr.H00759 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10018405-10028404 Eucalyptus grandis
Eucgr.H00759 10.0kb downstream 10.0kb downstream 23915 true Chr08: 9994490-10018404 Eucalyptus grandis
Eucgr.H00759 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9994490-10004489 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062296 5270 Rosid View MSA
123737404 5271 Pentapetalae View MSA
122789356 5272 Eudicot View MSA
122042556 5273 Angiosperm View MSA
123429117 5275 Viridiplantae View MSA
121346319 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.4316 0.0 50.934    
cufflinks 20.3529 0.0 56.5053    
cufflinks 19.1871 0.0 48.887    
cufflinks 29.0746 0.0 75.6709   High
cufflinks 31.2437 0.0 81.0455   High
cufflinks 16.8261 0.0 39.4318   Low

0 Strain