Gene : Eucgr.H01696 E. grandis v2.0
Defline:  (1 of 7) KOG2605 - OTU (ovarian tumor)-like cysteine protease Genomic Order:  1517
Name:  ? Eucgr.H01696 Secondary Identifier:  ? PAC:32044826
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01696 0.5kb upstream 0.5kb upstream 6200 true Chr08: 22288619-22294818 Eucalyptus grandis
Eucgr.H01696 0.5kb upstream 0.5kb upstream 500 false Chr08: 22288619-22289118 Eucalyptus grandis
Eucgr.H01696 0.5kb downstream 0.5kb downstream 6200 true Chr08: 22289119-22295318 Eucalyptus grandis
Eucgr.H01696 0.5kb downstream 0.5kb downstream 500 false Chr08: 22294819-22295318 Eucalyptus grandis
Eucgr.H01696 1.0kb upstream 1.0kb upstream 6700 true Chr08: 22288119-22294818 Eucalyptus grandis
Eucgr.H01696 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22288119-22289118 Eucalyptus grandis
Eucgr.H01696 1.0kb downstream 1.0kb downstream 6700 true Chr08: 22289119-22295818 Eucalyptus grandis
Eucgr.H01696 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22294819-22295818 Eucalyptus grandis
Eucgr.H01696 2.0kb upstream 2.0kb upstream 7700 true Chr08: 22287119-22294818 Eucalyptus grandis
Eucgr.H01696 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22287119-22289118 Eucalyptus grandis
Eucgr.H01696 2.0kb downstream 2.0kb downstream 7700 true Chr08: 22289119-22296818 Eucalyptus grandis
Eucgr.H01696 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22294819-22296818 Eucalyptus grandis
Eucgr.H01696 5.0kb upstream 5.0kb upstream 10700 true Chr08: 22284119-22294818 Eucalyptus grandis
Eucgr.H01696 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22284119-22289118 Eucalyptus grandis
Eucgr.H01696 5.0kb downstream 5.0kb downstream 10700 true Chr08: 22289119-22299818 Eucalyptus grandis
Eucgr.H01696 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22294819-22299818 Eucalyptus grandis
Eucgr.H01696 10.0kb upstream 10.0kb upstream 15700 true Chr08: 22279119-22294818 Eucalyptus grandis
Eucgr.H01696 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22279119-22289118 Eucalyptus grandis
Eucgr.H01696 10.0kb downstream 10.0kb downstream 15700 true Chr08: 22289119-22304818 Eucalyptus grandis
Eucgr.H01696 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22294819-22304818 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066483 5270 Rosid View MSA
123745546 5271 Pentapetalae View MSA
122787389 5272 Eudicot View MSA
122041608 5273 Angiosperm View MSA
121347051 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.47811 0.0 13.2659    
cufflinks 4.26114 0.0 10.6858    
cufflinks 3.05879 0.0 9.83273    
cufflinks 4.10221 0.0 12.2986    
cufflinks 2.22315 0.0 6.13168   Low
cufflinks 5.93586 0.0 14.2439   High

0 Strain