Gene : Eucgr.H01691 E. grandis v2.0
Defline:  (1 of 2) PTHR31580:SF3 - FILAMENT-LIKE PLANT PROTEIN 7 Genomic Order:  1512
Name:  ? Eucgr.H01691 Secondary Identifier:  ? PAC:32045188
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01691 0.5kb upstream 0.5kb upstream 5962 true Chr08: 22235326-22241287 Eucalyptus grandis
Eucgr.H01691 0.5kb upstream 0.5kb upstream 500 false Chr08: 22240788-22241287 Eucalyptus grandis
Eucgr.H01691 0.5kb downstream 0.5kb downstream 5962 true Chr08: 22234826-22240787 Eucalyptus grandis
Eucgr.H01691 0.5kb downstream 0.5kb downstream 500 false Chr08: 22234826-22235325 Eucalyptus grandis
Eucgr.H01691 1.0kb upstream 1.0kb upstream 6462 true Chr08: 22235326-22241787 Eucalyptus grandis
Eucgr.H01691 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22240788-22241787 Eucalyptus grandis
Eucgr.H01691 1.0kb downstream 1.0kb downstream 6462 true Chr08: 22234326-22240787 Eucalyptus grandis
Eucgr.H01691 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22234326-22235325 Eucalyptus grandis
Eucgr.H01691 2.0kb upstream 2.0kb upstream 7462 true Chr08: 22235326-22242787 Eucalyptus grandis
Eucgr.H01691 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22240788-22242787 Eucalyptus grandis
Eucgr.H01691 2.0kb downstream 2.0kb downstream 7462 true Chr08: 22233326-22240787 Eucalyptus grandis
Eucgr.H01691 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22233326-22235325 Eucalyptus grandis
Eucgr.H01691 5.0kb upstream 5.0kb upstream 10462 true Chr08: 22235326-22245787 Eucalyptus grandis
Eucgr.H01691 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22240788-22245787 Eucalyptus grandis
Eucgr.H01691 5.0kb downstream 5.0kb downstream 10462 true Chr08: 22230326-22240787 Eucalyptus grandis
Eucgr.H01691 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22230326-22235325 Eucalyptus grandis
Eucgr.H01691 10.0kb upstream 10.0kb upstream 15462 true Chr08: 22235326-22250787 Eucalyptus grandis
Eucgr.H01691 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22240788-22250787 Eucalyptus grandis
Eucgr.H01691 10.0kb downstream 10.0kb downstream 15462 true Chr08: 22225326-22240787 Eucalyptus grandis
Eucgr.H01691 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22225326-22235325 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061123 5270 Rosid View MSA
123744650 5271 Pentapetalae View MSA
122797725 5272 Eudicot View MSA
122048583 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.99254 0.0 4.91197    
cufflinks 25.7328 0.0 57.9305   High
cufflinks 1.77402 0.0 4.39911    
cufflinks 16.2837 0.0 36.1301   High
cufflinks 4.70574 0.0 10.7227    
cufflinks 1.37786 0.0 3.55278    

0 Strain