Gene : Eucgr.H01692 E. grandis v2.0
Defline:  (1 of 5) PF02338//PF02810 - OTU-like cysteine protease (OTU) // SEC-C motif (SEC-C) Genomic Order:  1513
Name:  ? Eucgr.H01692 Secondary Identifier:  ? PAC:32042346
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01692 0.5kb upstream 0.5kb upstream 5276 true Chr08: 22246682-22251957 Eucalyptus grandis
Eucgr.H01692 0.5kb upstream 0.5kb upstream 500 false Chr08: 22246682-22247181 Eucalyptus grandis
Eucgr.H01692 0.5kb downstream 0.5kb downstream 5276 true Chr08: 22247182-22252457 Eucalyptus grandis
Eucgr.H01692 0.5kb downstream 0.5kb downstream 500 false Chr08: 22251958-22252457 Eucalyptus grandis
Eucgr.H01692 1.0kb upstream 1.0kb upstream 5776 true Chr08: 22246182-22251957 Eucalyptus grandis
Eucgr.H01692 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22246182-22247181 Eucalyptus grandis
Eucgr.H01692 1.0kb downstream 1.0kb downstream 5776 true Chr08: 22247182-22252957 Eucalyptus grandis
Eucgr.H01692 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22251958-22252957 Eucalyptus grandis
Eucgr.H01692 2.0kb upstream 2.0kb upstream 6776 true Chr08: 22245182-22251957 Eucalyptus grandis
Eucgr.H01692 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22245182-22247181 Eucalyptus grandis
Eucgr.H01692 2.0kb downstream 2.0kb downstream 6776 true Chr08: 22247182-22253957 Eucalyptus grandis
Eucgr.H01692 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22251958-22253957 Eucalyptus grandis
Eucgr.H01692 5.0kb upstream 5.0kb upstream 9776 true Chr08: 22242182-22251957 Eucalyptus grandis
Eucgr.H01692 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22242182-22247181 Eucalyptus grandis
Eucgr.H01692 5.0kb downstream 5.0kb downstream 9776 true Chr08: 22247182-22256957 Eucalyptus grandis
Eucgr.H01692 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22251958-22256957 Eucalyptus grandis
Eucgr.H01692 10.0kb upstream 10.0kb upstream 14776 true Chr08: 22237182-22251957 Eucalyptus grandis
Eucgr.H01692 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22237182-22247181 Eucalyptus grandis
Eucgr.H01692 10.0kb downstream 10.0kb downstream 14776 true Chr08: 22247182-22261957 Eucalyptus grandis
Eucgr.H01692 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22251958-22261957 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066483 5270 Rosid View MSA
123745546 5271 Pentapetalae View MSA
122787389 5272 Eudicot View MSA
122041608 5273 Angiosperm View MSA
121347051 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.13703 0.0 6.05628    
cufflinks 0.611967 0.0 1.99046 Low Low
cufflinks 3.01183 0.0 8.20964    
cufflinks 1.16272 0.0 3.49033    
cufflinks 4.29649 0.0 11.3248   High
cufflinks 2.73564 0.0 7.62328    

0 Strain