Gene : Eucgr.H01724 E. grandis v2.0
Defline:  (1 of 16) PTHR12419:SF7 - OTU DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  1537
Name:  ? Eucgr.H01724 Secondary Identifier:  ? PAC:32042029
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01724 0.5kb upstream 0.5kb upstream 3539 true Chr08: 22684381-22687919 Eucalyptus grandis
Eucgr.H01724 0.5kb upstream 0.5kb upstream 500 false Chr08: 22684381-22684880 Eucalyptus grandis
Eucgr.H01724 0.5kb downstream 0.5kb downstream 3539 true Chr08: 22684881-22688419 Eucalyptus grandis
Eucgr.H01724 0.5kb downstream 0.5kb downstream 500 false Chr08: 22687920-22688419 Eucalyptus grandis
Eucgr.H01724 1.0kb upstream 1.0kb upstream 4039 true Chr08: 22683881-22687919 Eucalyptus grandis
Eucgr.H01724 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22683881-22684880 Eucalyptus grandis
Eucgr.H01724 1.0kb downstream 1.0kb downstream 4039 true Chr08: 22684881-22688919 Eucalyptus grandis
Eucgr.H01724 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22687920-22688919 Eucalyptus grandis
Eucgr.H01724 2.0kb upstream 2.0kb upstream 5039 true Chr08: 22682881-22687919 Eucalyptus grandis
Eucgr.H01724 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22682881-22684880 Eucalyptus grandis
Eucgr.H01724 2.0kb downstream 2.0kb downstream 5039 true Chr08: 22684881-22689919 Eucalyptus grandis
Eucgr.H01724 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22687920-22689919 Eucalyptus grandis
Eucgr.H01724 5.0kb upstream 5.0kb upstream 8039 true Chr08: 22679881-22687919 Eucalyptus grandis
Eucgr.H01724 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22679881-22684880 Eucalyptus grandis
Eucgr.H01724 5.0kb downstream 5.0kb downstream 8039 true Chr08: 22684881-22692919 Eucalyptus grandis
Eucgr.H01724 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22687920-22692919 Eucalyptus grandis
Eucgr.H01724 10.0kb upstream 10.0kb upstream 13039 true Chr08: 22674881-22687919 Eucalyptus grandis
Eucgr.H01724 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22674881-22684880 Eucalyptus grandis
Eucgr.H01724 10.0kb downstream 10.0kb downstream 13039 true Chr08: 22684881-22697919 Eucalyptus grandis
Eucgr.H01724 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22687920-22697919 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066483 5270 Rosid View MSA
123745546 5271 Pentapetalae View MSA
122787389 5272 Eudicot View MSA
122041608 5273 Angiosperm View MSA
121347051 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0580468 0.0 0.36892 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0845477 0.0 0.460656 Low  
cufflinks 0.00185669 0.0 0.0563902 Low Low
cufflinks 0.0919365 0.0 0.472179 Low  
cufflinks 0.438686 0.0 1.56546 Low High

0 Strain