Gene : Eucgr.H01706 E. grandis v2.0
Defline:  (1 of 16) PTHR12419:SF7 - OTU DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  1526
Name:  ? Eucgr.H01706 Secondary Identifier:  ? PAC:32041176
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01706 0.5kb upstream 0.5kb upstream 5782 true Chr08: 22479542-22485323 Eucalyptus grandis
Eucgr.H01706 0.5kb upstream 0.5kb upstream 500 false Chr08: 22479542-22480041 Eucalyptus grandis
Eucgr.H01706 0.5kb downstream 0.5kb downstream 5782 true Chr08: 22480042-22485823 Eucalyptus grandis
Eucgr.H01706 0.5kb downstream 0.5kb downstream 500 false Chr08: 22485324-22485823 Eucalyptus grandis
Eucgr.H01706 1.0kb upstream 1.0kb upstream 6282 true Chr08: 22479042-22485323 Eucalyptus grandis
Eucgr.H01706 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22479042-22480041 Eucalyptus grandis
Eucgr.H01706 1.0kb downstream 1.0kb downstream 6282 true Chr08: 22480042-22486323 Eucalyptus grandis
Eucgr.H01706 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22485324-22486323 Eucalyptus grandis
Eucgr.H01706 2.0kb upstream 2.0kb upstream 7282 true Chr08: 22478042-22485323 Eucalyptus grandis
Eucgr.H01706 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22478042-22480041 Eucalyptus grandis
Eucgr.H01706 2.0kb downstream 2.0kb downstream 7282 true Chr08: 22480042-22487323 Eucalyptus grandis
Eucgr.H01706 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22485324-22487323 Eucalyptus grandis
Eucgr.H01706 5.0kb upstream 5.0kb upstream 10282 true Chr08: 22475042-22485323 Eucalyptus grandis
Eucgr.H01706 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22475042-22480041 Eucalyptus grandis
Eucgr.H01706 5.0kb downstream 5.0kb downstream 10282 true Chr08: 22480042-22490323 Eucalyptus grandis
Eucgr.H01706 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22485324-22490323 Eucalyptus grandis
Eucgr.H01706 10.0kb upstream 10.0kb upstream 15282 true Chr08: 22470042-22485323 Eucalyptus grandis
Eucgr.H01706 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22470042-22480041 Eucalyptus grandis
Eucgr.H01706 10.0kb downstream 10.0kb downstream 15282 true Chr08: 22480042-22495323 Eucalyptus grandis
Eucgr.H01706 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22485324-22495323 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066483 5270 Rosid View MSA
123745546 5271 Pentapetalae View MSA
122787389 5272 Eudicot View MSA
122041608 5273 Angiosperm View MSA
121347051 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.51494 0.0 7.01169   High
cufflinks 1.40046 0.0 4.12434    
cufflinks 1.42992 0.0 4.22215    
cufflinks 0.839886 0.0 2.62397    
cufflinks 0.659668 0.0 2.13867 Low Low
cufflinks 2.02422 0.0 5.82594    

0 Strain