Gene : Eucgr.H01686 E. grandis v2.0
Defline:  (1 of 1) PTHR10322:SF21 - DNA POLYMERASE ALPHA CATALYTIC SUBUNIT Genomic Order:  1507
Name:  ? Eucgr.H01686 Secondary Identifier:  ? PAC:32043305
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01686 0.5kb upstream 0.5kb upstream 14910 true Chr08: 22184003-22198912 Eucalyptus grandis
Eucgr.H01686 0.5kb upstream 0.5kb upstream 500 false Chr08: 22184003-22184502 Eucalyptus grandis
Eucgr.H01686 0.5kb downstream 0.5kb downstream 14910 true Chr08: 22184503-22199412 Eucalyptus grandis
Eucgr.H01686 0.5kb downstream 0.5kb downstream 500 false Chr08: 22198913-22199412 Eucalyptus grandis
Eucgr.H01686 1.0kb upstream 1.0kb upstream 15410 true Chr08: 22183503-22198912 Eucalyptus grandis
Eucgr.H01686 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22183503-22184502 Eucalyptus grandis
Eucgr.H01686 1.0kb downstream 1.0kb downstream 15410 true Chr08: 22184503-22199912 Eucalyptus grandis
Eucgr.H01686 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22198913-22199912 Eucalyptus grandis
Eucgr.H01686 2.0kb upstream 2.0kb upstream 16410 true Chr08: 22182503-22198912 Eucalyptus grandis
Eucgr.H01686 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22182503-22184502 Eucalyptus grandis
Eucgr.H01686 2.0kb downstream 2.0kb downstream 16410 true Chr08: 22184503-22200912 Eucalyptus grandis
Eucgr.H01686 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22198913-22200912 Eucalyptus grandis
Eucgr.H01686 5.0kb upstream 5.0kb upstream 19410 true Chr08: 22179503-22198912 Eucalyptus grandis
Eucgr.H01686 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22179503-22184502 Eucalyptus grandis
Eucgr.H01686 5.0kb downstream 5.0kb downstream 19410 true Chr08: 22184503-22203912 Eucalyptus grandis
Eucgr.H01686 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22198913-22203912 Eucalyptus grandis
Eucgr.H01686 10.0kb upstream 10.0kb upstream 24410 true Chr08: 22174503-22198912 Eucalyptus grandis
Eucgr.H01686 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22174503-22184502 Eucalyptus grandis
Eucgr.H01686 10.0kb downstream 10.0kb downstream 24410 true Chr08: 22184503-22208912 Eucalyptus grandis
Eucgr.H01686 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22198913-22208912 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063602 5270 Rosid View MSA
123740668 5271 Pentapetalae View MSA
122786183 5272 Eudicot View MSA
122042985 5273 Angiosperm View MSA
121344859 5274 Embryophyte View MSA
123423980 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.63313 0.0 10.3902    
cufflinks 1.00946 0.0 2.56301    
cufflinks 2.68138 0.0 6.20393    
cufflinks 0.166766 0.0 0.508536 Low Low
cufflinks 2.02254 0.0 4.79817    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain