Gene : Eucgr.H01605 E. grandis v2.0
Defline:  (1 of 2) PTHR13268:SF2 - AUTOPHAGY-RELATED PROTEIN 18G Genomic Order:  1034
Name:  ? Eucgr.H01605 Secondary Identifier:  ? PAC:32041358
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01605 0.5kb upstream 0.5kb upstream 7893 true Chr08: 14775871-14783763 Eucalyptus grandis
Eucgr.H01605 0.5kb upstream 0.5kb upstream 500 false Chr08: 14783264-14783763 Eucalyptus grandis
Eucgr.H01605 0.5kb downstream 0.5kb downstream 7893 true Chr08: 14775371-14783263 Eucalyptus grandis
Eucgr.H01605 0.5kb downstream 0.5kb downstream 500 false Chr08: 14775371-14775870 Eucalyptus grandis
Eucgr.H01605 1.0kb upstream 1.0kb upstream 8393 true Chr08: 14775871-14784263 Eucalyptus grandis
Eucgr.H01605 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14783264-14784263 Eucalyptus grandis
Eucgr.H01605 1.0kb downstream 1.0kb downstream 8393 true Chr08: 14774871-14783263 Eucalyptus grandis
Eucgr.H01605 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14774871-14775870 Eucalyptus grandis
Eucgr.H01605 2.0kb upstream 2.0kb upstream 9393 true Chr08: 14775871-14785263 Eucalyptus grandis
Eucgr.H01605 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14783264-14785263 Eucalyptus grandis
Eucgr.H01605 2.0kb downstream 2.0kb downstream 9393 true Chr08: 14773871-14783263 Eucalyptus grandis
Eucgr.H01605 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14773871-14775870 Eucalyptus grandis
Eucgr.H01605 5.0kb upstream 5.0kb upstream 12393 true Chr08: 14775871-14788263 Eucalyptus grandis
Eucgr.H01605 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14783264-14788263 Eucalyptus grandis
Eucgr.H01605 5.0kb downstream 5.0kb downstream 12393 true Chr08: 14770871-14783263 Eucalyptus grandis
Eucgr.H01605 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14770871-14775870 Eucalyptus grandis
Eucgr.H01605 10.0kb upstream 10.0kb upstream 17393 true Chr08: 14775871-14793263 Eucalyptus grandis
Eucgr.H01605 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14783264-14793263 Eucalyptus grandis
Eucgr.H01605 10.0kb downstream 10.0kb downstream 17393 true Chr08: 14765871-14783263 Eucalyptus grandis
Eucgr.H01605 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14765871-14775870 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066220 5270 Rosid View MSA
123744735 5271 Pentapetalae View MSA
122790134 5272 Eudicot View MSA
122047922 5273 Angiosperm View MSA
121350059 5274 Embryophyte View MSA
123424091 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6178 0.0 27.4997    
cufflinks 22.4155 0.0 59.4356   High
cufflinks 10.5886 0.0 25.3725    
cufflinks 15.1138 0.0 39.0836    
cufflinks 9.95318 0.0 25.5937    
cufflinks 14.2903 0.0 37.6297    

0 Strain