Gene : Eucgr.H01611 E. grandis v2.0
Defline:  (1 of 2) PTHR23024:SF98 - GIBBERELLIN RECEPTOR GID1B Genomic Order:  1029
Name:  ? Eucgr.H01611 Secondary Identifier:  ? PAC:32045275
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6303 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01611 0.5kb upstream 0.5kb upstream 3159 true Chr08: 14722701-14725859 Eucalyptus grandis
Eucgr.H01611 0.5kb upstream 0.5kb upstream 500 false Chr08: 14722701-14723200 Eucalyptus grandis
Eucgr.H01611 0.5kb downstream 0.5kb downstream 3159 true Chr08: 14723201-14726359 Eucalyptus grandis
Eucgr.H01611 0.5kb downstream 0.5kb downstream 500 false Chr08: 14725860-14726359 Eucalyptus grandis
Eucgr.H01611 1.0kb upstream 1.0kb upstream 3659 true Chr08: 14722201-14725859 Eucalyptus grandis
Eucgr.H01611 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14722201-14723200 Eucalyptus grandis
Eucgr.H01611 1.0kb downstream 1.0kb downstream 3659 true Chr08: 14723201-14726859 Eucalyptus grandis
Eucgr.H01611 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14725860-14726859 Eucalyptus grandis
Eucgr.H01611 2.0kb upstream 2.0kb upstream 4659 true Chr08: 14721201-14725859 Eucalyptus grandis
Eucgr.H01611 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14721201-14723200 Eucalyptus grandis
Eucgr.H01611 2.0kb downstream 2.0kb downstream 4659 true Chr08: 14723201-14727859 Eucalyptus grandis
Eucgr.H01611 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14725860-14727859 Eucalyptus grandis
Eucgr.H01611 5.0kb upstream 5.0kb upstream 7659 true Chr08: 14718201-14725859 Eucalyptus grandis
Eucgr.H01611 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14718201-14723200 Eucalyptus grandis
Eucgr.H01611 5.0kb downstream 5.0kb downstream 7659 true Chr08: 14723201-14730859 Eucalyptus grandis
Eucgr.H01611 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14725860-14730859 Eucalyptus grandis
Eucgr.H01611 10.0kb upstream 10.0kb upstream 12659 true Chr08: 14713201-14725859 Eucalyptus grandis
Eucgr.H01611 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14713201-14723200 Eucalyptus grandis
Eucgr.H01611 10.0kb downstream 10.0kb downstream 12659 true Chr08: 14723201-14735859 Eucalyptus grandis
Eucgr.H01611 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14725860-14735859 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064220 5270 Rosid View MSA
123745605 5271 Pentapetalae View MSA
122795616 5272 Eudicot View MSA
122044098 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350684 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4241 0.0 26.0586    
cufflinks 5.2539 0.0 12.8494    
cufflinks 18.3702 0.0 41.0275   High
cufflinks 2.22234 0.0 5.9495    
cufflinks 0.564009 0.0 1.74451 Low Low
cufflinks 9.68448 0.0 22.2517    

0 Strain