Gene : Eucgr.H01588 E. grandis v2.0
Defline:  (1 of 11) PTHR14859 - CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR Genomic Order:  1046
Name:  ? Eucgr.H01588 Secondary Identifier:  ? PAC:32042862
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01588 0.5kb upstream 0.5kb upstream 5487 true Chr08: 15059739-15065225 Eucalyptus grandis
Eucgr.H01588 0.5kb upstream 0.5kb upstream 500 false Chr08: 15064726-15065225 Eucalyptus grandis
Eucgr.H01588 0.5kb downstream 0.5kb downstream 5487 true Chr08: 15059239-15064725 Eucalyptus grandis
Eucgr.H01588 0.5kb downstream 0.5kb downstream 500 false Chr08: 15059239-15059738 Eucalyptus grandis
Eucgr.H01588 1.0kb upstream 1.0kb upstream 5987 true Chr08: 15059739-15065725 Eucalyptus grandis
Eucgr.H01588 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15064726-15065725 Eucalyptus grandis
Eucgr.H01588 1.0kb downstream 1.0kb downstream 5987 true Chr08: 15058739-15064725 Eucalyptus grandis
Eucgr.H01588 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15058739-15059738 Eucalyptus grandis
Eucgr.H01588 2.0kb upstream 2.0kb upstream 6987 true Chr08: 15059739-15066725 Eucalyptus grandis
Eucgr.H01588 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15064726-15066725 Eucalyptus grandis
Eucgr.H01588 2.0kb downstream 2.0kb downstream 6987 true Chr08: 15057739-15064725 Eucalyptus grandis
Eucgr.H01588 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15057739-15059738 Eucalyptus grandis
Eucgr.H01588 5.0kb upstream 5.0kb upstream 9987 true Chr08: 15059739-15069725 Eucalyptus grandis
Eucgr.H01588 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15064726-15069725 Eucalyptus grandis
Eucgr.H01588 5.0kb downstream 5.0kb downstream 9987 true Chr08: 15054739-15064725 Eucalyptus grandis
Eucgr.H01588 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15054739-15059738 Eucalyptus grandis
Eucgr.H01588 10.0kb upstream 10.0kb upstream 14987 true Chr08: 15059739-15074725 Eucalyptus grandis
Eucgr.H01588 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15064726-15074725 Eucalyptus grandis
Eucgr.H01588 10.0kb downstream 10.0kb downstream 14987 true Chr08: 15049739-15064725 Eucalyptus grandis
Eucgr.H01588 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15049739-15059738 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067214 5270 Rosid View MSA
123743998 5271 Pentapetalae View MSA
122789343 5272 Eudicot View MSA
122044704 5273 Angiosperm View MSA
121310332 5274 Embryophyte View MSA
123347845 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.38236 0.0 6.09295    
cufflinks 2.11718 0.0 5.47588    
cufflinks 2.73031 0.0 6.88621    
cufflinks 2.31936 0.0 5.93515    
cufflinks 5.17226 0.0 12.2324   High
cufflinks 1.55642 0.0 4.13974   Low

0 Strain