Gene : Eucgr.H01594 E. grandis v2.0
Defline:  (1 of 9) PF05097 - Protein of unknown function (DUF688) (DUF688) Genomic Order:  1042
Name:  ? Eucgr.H01594 Secondary Identifier:  ? PAC:32041136
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01594 0.5kb upstream 0.5kb upstream 1726 true Chr08: 14957737-14959462 Eucalyptus grandis
Eucgr.H01594 0.5kb upstream 0.5kb upstream 500 false Chr08: 14957737-14958236 Eucalyptus grandis
Eucgr.H01594 0.5kb downstream 0.5kb downstream 1726 true Chr08: 14958237-14959962 Eucalyptus grandis
Eucgr.H01594 0.5kb downstream 0.5kb downstream 500 false Chr08: 14959463-14959962 Eucalyptus grandis
Eucgr.H01594 1.0kb upstream 1.0kb upstream 2226 true Chr08: 14957237-14959462 Eucalyptus grandis
Eucgr.H01594 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14957237-14958236 Eucalyptus grandis
Eucgr.H01594 1.0kb downstream 1.0kb downstream 2226 true Chr08: 14958237-14960462 Eucalyptus grandis
Eucgr.H01594 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14959463-14960462 Eucalyptus grandis
Eucgr.H01594 2.0kb upstream 2.0kb upstream 3226 true Chr08: 14956237-14959462 Eucalyptus grandis
Eucgr.H01594 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14956237-14958236 Eucalyptus grandis
Eucgr.H01594 2.0kb downstream 2.0kb downstream 3226 true Chr08: 14958237-14961462 Eucalyptus grandis
Eucgr.H01594 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14959463-14961462 Eucalyptus grandis
Eucgr.H01594 5.0kb upstream 5.0kb upstream 6226 true Chr08: 14953237-14959462 Eucalyptus grandis
Eucgr.H01594 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14953237-14958236 Eucalyptus grandis
Eucgr.H01594 5.0kb downstream 5.0kb downstream 6226 true Chr08: 14958237-14964462 Eucalyptus grandis
Eucgr.H01594 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14959463-14964462 Eucalyptus grandis
Eucgr.H01594 10.0kb upstream 10.0kb upstream 11226 true Chr08: 14948237-14959462 Eucalyptus grandis
Eucgr.H01594 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14948237-14958236 Eucalyptus grandis
Eucgr.H01594 10.0kb downstream 10.0kb downstream 11226 true Chr08: 14958237-14969462 Eucalyptus grandis
Eucgr.H01594 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14959463-14969462 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064528 5270 Rosid View MSA
123742018 5271 Pentapetalae View MSA
122787181 5272 Eudicot View MSA
122047790 5273 Angiosperm View MSA
121310794 5274 Embryophyte View MSA
123348192 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.178379 0.0 0.767748 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.550746 0.0 1.92641    
cufflinks 0.242317 0.0 0.942971 Low  
cufflinks 0.390425 0.0 1.42969 Low  
cufflinks 0.50953 0.0 1.77106 Low  

0 Strain