Gene : Eucgr.H01558 E. grandis v2.0
Defline:  (1 of 11) PTHR14859 - CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR Genomic Order:  1070
Name:  ? Eucgr.H01558 Secondary Identifier:  ? PAC:32042567
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01558 0.5kb upstream 0.5kb upstream 3467 true Chr08: 15450626-15454092 Eucalyptus grandis
Eucgr.H01558 0.5kb upstream 0.5kb upstream 500 false Chr08: 15453593-15454092 Eucalyptus grandis
Eucgr.H01558 0.5kb downstream 0.5kb downstream 3467 true Chr08: 15450126-15453592 Eucalyptus grandis
Eucgr.H01558 0.5kb downstream 0.5kb downstream 500 false Chr08: 15450126-15450625 Eucalyptus grandis
Eucgr.H01558 1.0kb upstream 1.0kb upstream 3967 true Chr08: 15450626-15454592 Eucalyptus grandis
Eucgr.H01558 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15453593-15454592 Eucalyptus grandis
Eucgr.H01558 1.0kb downstream 1.0kb downstream 3967 true Chr08: 15449626-15453592 Eucalyptus grandis
Eucgr.H01558 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15449626-15450625 Eucalyptus grandis
Eucgr.H01558 2.0kb upstream 2.0kb upstream 4967 true Chr08: 15450626-15455592 Eucalyptus grandis
Eucgr.H01558 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15453593-15455592 Eucalyptus grandis
Eucgr.H01558 2.0kb downstream 2.0kb downstream 4967 true Chr08: 15448626-15453592 Eucalyptus grandis
Eucgr.H01558 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15448626-15450625 Eucalyptus grandis
Eucgr.H01558 5.0kb upstream 5.0kb upstream 7967 true Chr08: 15450626-15458592 Eucalyptus grandis
Eucgr.H01558 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15453593-15458592 Eucalyptus grandis
Eucgr.H01558 5.0kb downstream 5.0kb downstream 7967 true Chr08: 15445626-15453592 Eucalyptus grandis
Eucgr.H01558 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15445626-15450625 Eucalyptus grandis
Eucgr.H01558 10.0kb upstream 10.0kb upstream 12967 true Chr08: 15450626-15463592 Eucalyptus grandis
Eucgr.H01558 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15453593-15463592 Eucalyptus grandis
Eucgr.H01558 10.0kb downstream 10.0kb downstream 12967 true Chr08: 15440626-15453592 Eucalyptus grandis
Eucgr.H01558 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15440626-15450625 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067214 5270 Rosid View MSA
123743998 5271 Pentapetalae View MSA
122789343 5272 Eudicot View MSA
122044704 5273 Angiosperm View MSA
121310332 5274 Embryophyte View MSA
123347845 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.861717 0.0 2.70518   Low
cufflinks 2.55539 0.0 7.14659    
cufflinks 1.91728 0.0 5.52159    
cufflinks 2.09313 0.0 5.97707    
cufflinks 2.58324 0.0 7.19885    
cufflinks 1.53172 0.0 4.45638    

0 Strain