Gene : Eucgr.H01487 E. grandis v2.0
Defline:  (1 of 1) PTHR11514:SF28 - TRANSCRIPTION FACTOR TT8 Genomic Order:  1128
Name:  ? Eucgr.H01487 Secondary Identifier:  ? PAC:32044563
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01487 0.5kb upstream 0.5kb upstream 7589 true Chr08: 16356164-16363752 Eucalyptus grandis
Eucgr.H01487 0.5kb upstream 0.5kb upstream 500 false Chr08: 16356164-16356663 Eucalyptus grandis
Eucgr.H01487 0.5kb downstream 0.5kb downstream 7589 true Chr08: 16356664-16364252 Eucalyptus grandis
Eucgr.H01487 0.5kb downstream 0.5kb downstream 500 false Chr08: 16363753-16364252 Eucalyptus grandis
Eucgr.H01487 1.0kb upstream 1.0kb upstream 8089 true Chr08: 16355664-16363752 Eucalyptus grandis
Eucgr.H01487 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16355664-16356663 Eucalyptus grandis
Eucgr.H01487 1.0kb downstream 1.0kb downstream 8089 true Chr08: 16356664-16364752 Eucalyptus grandis
Eucgr.H01487 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16363753-16364752 Eucalyptus grandis
Eucgr.H01487 2.0kb upstream 2.0kb upstream 9089 true Chr08: 16354664-16363752 Eucalyptus grandis
Eucgr.H01487 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16354664-16356663 Eucalyptus grandis
Eucgr.H01487 2.0kb downstream 2.0kb downstream 9089 true Chr08: 16356664-16365752 Eucalyptus grandis
Eucgr.H01487 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16363753-16365752 Eucalyptus grandis
Eucgr.H01487 5.0kb upstream 5.0kb upstream 12089 true Chr08: 16351664-16363752 Eucalyptus grandis
Eucgr.H01487 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16351664-16356663 Eucalyptus grandis
Eucgr.H01487 5.0kb downstream 5.0kb downstream 12089 true Chr08: 16356664-16368752 Eucalyptus grandis
Eucgr.H01487 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16363753-16368752 Eucalyptus grandis
Eucgr.H01487 10.0kb upstream 10.0kb upstream 17089 true Chr08: 16346664-16363752 Eucalyptus grandis
Eucgr.H01487 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16346664-16356663 Eucalyptus grandis
Eucgr.H01487 10.0kb downstream 10.0kb downstream 17089 true Chr08: 16356664-16373752 Eucalyptus grandis
Eucgr.H01487 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16363753-16373752 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064809 5270 Rosid View MSA
123747092 5271 Pentapetalae View MSA
122794545 5272 Eudicot View MSA
122045232 5273 Angiosperm View MSA
121347746 5274 Embryophyte View MSA
123380612 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.236 0.0 32.1925    
cufflinks 12.4158 0.0 28.5479    
cufflinks 12.6772 0.0 29.1355    
cufflinks 3.67429 0.0 10.9023    
cufflinks 1.03106 0.0 3.13416   Low
cufflinks 19.9211 0.0 44.7134    

0 Strain