Gene : Eucgr.H01477 E. grandis v2.0
Defline:  (1 of 3) PTHR15615:SF20 - CYCLIN FAMILY PROTEIN-RELATED Genomic Order:  1137
Name:  ? Eucgr.H01477 Secondary Identifier:  ? PAC:32045208
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01477 0.5kb upstream 0.5kb upstream 4399 true Chr08: 16498836-16503234 Eucalyptus grandis
Eucgr.H01477 0.5kb upstream 0.5kb upstream 500 false Chr08: 16498836-16499335 Eucalyptus grandis
Eucgr.H01477 0.5kb downstream 0.5kb downstream 4399 true Chr08: 16499336-16503734 Eucalyptus grandis
Eucgr.H01477 0.5kb downstream 0.5kb downstream 500 false Chr08: 16503235-16503734 Eucalyptus grandis
Eucgr.H01477 1.0kb upstream 1.0kb upstream 4899 true Chr08: 16498336-16503234 Eucalyptus grandis
Eucgr.H01477 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16498336-16499335 Eucalyptus grandis
Eucgr.H01477 1.0kb downstream 1.0kb downstream 4899 true Chr08: 16499336-16504234 Eucalyptus grandis
Eucgr.H01477 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16503235-16504234 Eucalyptus grandis
Eucgr.H01477 2.0kb upstream 2.0kb upstream 5899 true Chr08: 16497336-16503234 Eucalyptus grandis
Eucgr.H01477 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16497336-16499335 Eucalyptus grandis
Eucgr.H01477 2.0kb downstream 2.0kb downstream 5899 true Chr08: 16499336-16505234 Eucalyptus grandis
Eucgr.H01477 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16503235-16505234 Eucalyptus grandis
Eucgr.H01477 5.0kb upstream 5.0kb upstream 8899 true Chr08: 16494336-16503234 Eucalyptus grandis
Eucgr.H01477 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16494336-16499335 Eucalyptus grandis
Eucgr.H01477 5.0kb downstream 5.0kb downstream 8899 true Chr08: 16499336-16508234 Eucalyptus grandis
Eucgr.H01477 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16503235-16508234 Eucalyptus grandis
Eucgr.H01477 10.0kb upstream 10.0kb upstream 13899 true Chr08: 16489336-16503234 Eucalyptus grandis
Eucgr.H01477 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16489336-16499335 Eucalyptus grandis
Eucgr.H01477 10.0kb downstream 10.0kb downstream 13899 true Chr08: 16499336-16513234 Eucalyptus grandis
Eucgr.H01477 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16503235-16513234 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064873 5270 Rosid View MSA
123741517 5271 Pentapetalae View MSA
122792794 5272 Eudicot View MSA
122044853 5273 Angiosperm View MSA
121349638 5274 Embryophyte View MSA
123428486 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.0041 0.0 55.9036    
cufflinks 70.2759 0.0 185.63 High  
cufflinks 16.2065 0.0 44.8836   Low
cufflinks 45.0066 0.0 124.325 High  
cufflinks 93.7844 0.0 257.001 High High
cufflinks 28.7811 0.0 64.672    

0 Strain