Gene : Eucgr.H01506 E. grandis v2.0
Defline:  (1 of 2) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase Genomic Order:  1111
Name:  ? Eucgr.H01506 Secondary Identifier:  ? PAC:32041274
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis TRNA-CHARGING-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01506 0.5kb upstream 0.5kb upstream 5255 true Chr08: 16095119-16100373 Eucalyptus grandis
Eucgr.H01506 0.5kb upstream 0.5kb upstream 500 false Chr08: 16095119-16095618 Eucalyptus grandis
Eucgr.H01506 0.5kb downstream 0.5kb downstream 5255 true Chr08: 16095619-16100873 Eucalyptus grandis
Eucgr.H01506 0.5kb downstream 0.5kb downstream 500 false Chr08: 16100374-16100873 Eucalyptus grandis
Eucgr.H01506 1.0kb upstream 1.0kb upstream 5755 true Chr08: 16094619-16100373 Eucalyptus grandis
Eucgr.H01506 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16094619-16095618 Eucalyptus grandis
Eucgr.H01506 1.0kb downstream 1.0kb downstream 5755 true Chr08: 16095619-16101373 Eucalyptus grandis
Eucgr.H01506 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16100374-16101373 Eucalyptus grandis
Eucgr.H01506 2.0kb upstream 2.0kb upstream 6755 true Chr08: 16093619-16100373 Eucalyptus grandis
Eucgr.H01506 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16093619-16095618 Eucalyptus grandis
Eucgr.H01506 2.0kb downstream 2.0kb downstream 6755 true Chr08: 16095619-16102373 Eucalyptus grandis
Eucgr.H01506 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16100374-16102373 Eucalyptus grandis
Eucgr.H01506 5.0kb upstream 5.0kb upstream 9755 true Chr08: 16090619-16100373 Eucalyptus grandis
Eucgr.H01506 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16090619-16095618 Eucalyptus grandis
Eucgr.H01506 5.0kb downstream 5.0kb downstream 9755 true Chr08: 16095619-16105373 Eucalyptus grandis
Eucgr.H01506 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16100374-16105373 Eucalyptus grandis
Eucgr.H01506 10.0kb upstream 10.0kb upstream 14755 true Chr08: 16085619-16100373 Eucalyptus grandis
Eucgr.H01506 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16085619-16095618 Eucalyptus grandis
Eucgr.H01506 10.0kb downstream 10.0kb downstream 14755 true Chr08: 16095619-16110373 Eucalyptus grandis
Eucgr.H01506 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16100374-16110373 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066090 5270 Rosid View MSA
123749882 5271 Pentapetalae View MSA
122789988 5272 Eudicot View MSA
122047618 5273 Angiosperm View MSA
121344832 5274 Embryophyte View MSA
123424388 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.2484 0.0 34.5773    
cufflinks 14.2014 0.0 32.1796    
cufflinks 14.4086 0.0 32.5568    
cufflinks 15.3613 0.0 34.9352    
cufflinks 15.7917 0.0 35.8998   High
cufflinks 13.4367 0.0 30.1774   Low

0 Strain