Gene : Eucgr.H01461 E. grandis v2.0
Defline:  (1 of 2) PTHR24193//PTHR24193:SF88 - ANKYRIN REPEAT PROTEIN Genomic Order:  1151
Name:  ? Eucgr.H01461 Secondary Identifier:  ? PAC:32045695
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01461 0.5kb upstream 0.5kb upstream 3367 true Chr08: 16676198-16679564 Eucalyptus grandis
Eucgr.H01461 0.5kb upstream 0.5kb upstream 500 false Chr08: 16679065-16679564 Eucalyptus grandis
Eucgr.H01461 0.5kb downstream 0.5kb downstream 3367 true Chr08: 16675698-16679064 Eucalyptus grandis
Eucgr.H01461 0.5kb downstream 0.5kb downstream 500 false Chr08: 16675698-16676197 Eucalyptus grandis
Eucgr.H01461 1.0kb upstream 1.0kb upstream 3867 true Chr08: 16676198-16680064 Eucalyptus grandis
Eucgr.H01461 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16679065-16680064 Eucalyptus grandis
Eucgr.H01461 1.0kb downstream 1.0kb downstream 3867 true Chr08: 16675198-16679064 Eucalyptus grandis
Eucgr.H01461 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16675198-16676197 Eucalyptus grandis
Eucgr.H01461 2.0kb upstream 2.0kb upstream 4867 true Chr08: 16676198-16681064 Eucalyptus grandis
Eucgr.H01461 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16679065-16681064 Eucalyptus grandis
Eucgr.H01461 2.0kb downstream 2.0kb downstream 4867 true Chr08: 16674198-16679064 Eucalyptus grandis
Eucgr.H01461 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16674198-16676197 Eucalyptus grandis
Eucgr.H01461 5.0kb upstream 5.0kb upstream 7867 true Chr08: 16676198-16684064 Eucalyptus grandis
Eucgr.H01461 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16679065-16684064 Eucalyptus grandis
Eucgr.H01461 5.0kb downstream 5.0kb downstream 7867 true Chr08: 16671198-16679064 Eucalyptus grandis
Eucgr.H01461 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16671198-16676197 Eucalyptus grandis
Eucgr.H01461 10.0kb upstream 10.0kb upstream 12867 true Chr08: 16676198-16689064 Eucalyptus grandis
Eucgr.H01461 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16679065-16689064 Eucalyptus grandis
Eucgr.H01461 10.0kb downstream 10.0kb downstream 12867 true Chr08: 16666198-16679064 Eucalyptus grandis
Eucgr.H01461 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16666198-16676197 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068894 5270 Rosid View MSA
123744491 5271 Pentapetalae View MSA
122791485 5272 Eudicot View MSA
122047737 5273 Angiosperm View MSA
121344886 5274 Embryophyte View MSA
123428373 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.0594 0.0 64.7678 High  
cufflinks 11.0109 0.0 25.9711   Low
cufflinks 20.6635 0.0 46.6522    
cufflinks 16.3641 0.0 37.3888    
cufflinks 25.7854 0.0 57.6246    
cufflinks 72.7071 0.0 161.402 High High

0 Strain